Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01983 ATGGAACCAGCTTCAGCTGATTCTTCATCTCAACCTACTCCTCCAGTTTCTAATACCGAAGAACATCACTCAGCCAAAGTATCTGGACAAATTGGCAATGCACGTGATTCACCATCGTCACCTGCTTCTGGCATATCATCCTGGGCAAGAAATCTGACATTCCCCCAGGCCCTTGGGCTTGGAGGAGCACAACAGAACTCGCAGACCGAAAACACAGGCATGTCAGCTTTTGCTCGCCTGACTGGTGGGCTTGGATTGCGAATGCCATCAAATGAAACTGCTGCTCCAGTCAATTCAGGAGCTGAGCAATCTAACTTGATTGAATCCGTCACCAAAGGGTTGGTGGACTCTTCCAAGAGTGCAGTAAAGGCAGTGCAGATCAAAGCACGCCATATTGTCTCTCAAAATAAACGTAGATACCAGGAAGATGGATTTGATTTGGATATGACATACATCACTGAAAATATAATTGCTATGGGATTTCCGGGTGGTGATTTTAGCTCTGGAATTTTTGGATACATTGAGGGGTTCTATCGCAATCACATGGATGAAGTGATCAAGTTTTTTGAGACTCATCATAAGGGAAAGTACAAAGTATACAATCTTTGTTCAGAAAGGTTATATGACGGATCATTATTCCAGGGGAAGGTTGCAACTTTCCCATTTACTGATCATAATTGCCCTCCTATTCAACTTATAGCATCATTTTGTCGAAGTGCATATTCATGGTTGAAGGAGGATATTCAAAATGTGGTGGTTGTTCATTGTAAAGCTGGTATGGGGAGGACTGGACTGATGATATGTAGCCTTCTTTTGTTTCTTAAGTTCTTCCCGACTGCAGAGGAAGCCATTGATTACTTTAACCATAAAAGATGTGTAGATGGAAAGGCTCTAGTCCTCCCTAGTCAGATTAGATATGTAAAATACTTTGAACGGACTTTTACACACTTCAATGGAGAAGTCCAGCCTGGACGAAGGTGCATGCTAAGAGGGTTTCGGCTTCACAAATGCCCTTATTGGGTTAGACCATCTATTACAATTTCTGATCATAAGGGAATTCTTTTTACCACAAGAAAGCATCCCAAAACAAAGGATCTAATGCCAGAAGATTTCTGGATTAGTGCACCAAAGAAAGGAATTGTGGTTTTTGCACTACCAGGAGAGCCTGGTCTAGCAGAGTTAGTAGGAGATTTCAAAATTCATTTTCAAGATCGACAGGGAGATTTCTACTGTTGGATGAATACAACAATGACAGAAAACCGAACAATTTTGGATGGTTCAGATTTTGATGGTTTCGACAAGAGAAAGATCCCTACTCCAGGATTCAAGGTGGAAGTTTTGATGATAGACTATAATGGCACCCTACCTGCAAGGACAAAATCGAATCCTGCCAACAAAGGATCTGATGGAAACACAAGCAATGGCCAACCTGGTCCAAAGCTACTACATCTAATTCAAGTGAGAGTAAAGTCCCTAGAAATGGAGATGATGATGTATTCTCAGACAGTGACGAAGAGGAGACCCGGGAATACACAAAGCAAGAAAGCTGCAACTGAGTACAAATTTATGGCACCTCATCAAGTATCTGAGGCAACAACAGACCATGTAGGGATGTTGACACACACAACAGGATCAGTTGTCACTACAGCATGA 1653 0.4211 MEPASADSSSQPTPPVSNTEEHHSAKVSGQIGNARDSPSSPASGISSWARNLTFPQALGLGGAQQNSQTENTGMSAFARLTGGLGLRMPSNETAAPVNSGAEQSNLIESVTKGLVDSSKSAVKAVQIKARHIVSQNKRRYQEDGFDLDMTYITENIIAMGFPGGDFSSGIFGYIEGFYRNHMDEVIKFFETHHKGKYKVYNLCSERLYDGSLFQGKVATFPFTDHNCPPIQLIASFCRSAYSWLKEDIQNVVVVHCKAGMGRTGLMICSLLLFLKFFPTAEEAIDYFNHKRCVDGKALVLPSQIRYVKYFERTFTHFNGEVQPGRRCMLRGFRLHKCPYWVRPSITISDHKGILFTTRKHPKTKDLMPEDFWISAPKKGIVVFALPGEPGLAELVGDFKIHFQDRQGDFYCWMNTTMTENRTILDGSDFDGFDKRKIPTPGFKVEVLMIDYNGTLPARTKSNPANKGSDGNTSNGQPGPKLLHLIQVRVKSLEMEMMMYSQTVTKRRPGNTQSKKAATEYKFMAPHQVSEATTDHVGMLTHTTGSVVTTA 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01983 550 ProSiteProfiles C2 tensin-type domain profile. 324 451 IPR014020 -
Pumo8g01983 550 MobiDBLite consensus disorder prediction 1 47 - -
Pumo8g01983 550 MobiDBLite consensus disorder prediction 457 481 - -
Pumo8g01983 550 Gene3D Protein tyrosine phosphatase superfamily 123 320 IPR029021 -
Pumo8g01983 550 MobiDBLite consensus disorder prediction 457 479 - -
Pumo8g01983 550 CDD PTP_PTEN 148 312 IPR045101 GO:0016791
Pumo8g01983 550 ProSitePatterns Tyrosine specific protein phosphatases active site. 254 264 IPR016130 GO:0016311|GO:0016791
Pumo8g01983 550 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 115 473 - -
Pumo8g01983 550 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 151 317 IPR029021 -
Pumo8g01983 550 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 252 291 IPR000387 GO:0016311|GO:0016791
Pumo8g01983 550 ProSiteProfiles Phosphatase tensin-type domain profile. 138 317 IPR029023 -
Pumo8g01983 550 SMART PTEN_C2_2 322 450 IPR014020 -
Pumo8g01983 550 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 123 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01983 Pumo-Chr8 56454430 56462795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01983 42 466 Protein tyrosine phosphatase (PTP) family AT3G19420 72.791 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01983 K01110 - gmx:100801622 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01983 8 56454430 56462795 Pumo8g01983 8 56454430 56462795 ECH
Pumo8g01983 8 56454430 56462795 Pumo3g00613 3 9227629 9231588 PCT