Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01968 ATGGCGTCGAAGCCTTCGCCTTCTTCTTCGCCCTCTTCTTCCAGATCAGAGCCTCTCGTCGATCCCTCCGCAAACAAAGCGGAGGCTGCAAGTCCGACTGTTAAAGATGTGTTACTGGTTATTGATTCTTTAAAGAAACAAGTTGCTGTGGAACGGATTGTTTATGTAAAGAAAAGAATAGATGAAAACAGACAGAAGCTGGTTGGTGTCACTAACCATCTCTGCACGATGTCAACGGAGAGAAGGAACTGCAGCATTACTGATATGAATAGAAGTCTGGACCTACTGACGAAGAGGCAAAAAGATGCAATTGATATGCACAACGGTGTTCATGCGAGTAATGGTGATGTGGAGAGCAATGGCTATCATGACGATGGCCATGGTTCTACAGCAGTTCTTCTAGGGTCTAATGTTGCCGTGAAGAATGCTGTTCGTCCTATCAAGTTACCTGAAGTAAAAAAACTGCCTCCTTACACTACATGGATTTTTCTGGACAGAAATCAAAGAATGACCGAGGATCAGTCAGTTGTAGGCCGGAGGCGAATTTATTATGATCAAAATGGTGGAGAAGCACTTATCTGCAGTGACAGTGAGGAGGAAATTATGGAGGATGAAGAGGAGAAAAGAGAATTTATAGAATCAGAAGATTATATACTTCGCATGACTGTCAAAGAGTTTGGTTTAACTGACGTTGTTCTGGAGTCGTTGGCTCAGTGTTTTTCTAGAAACACTAGTGAAATTAAGGCAAGGTATGAAGCTCTTAGTATTCAAGACAATGCTGGTGGGTGTTCCAAGGCTGGAGATTCTGAAGAGAATTCTCAAAGTGGCAATTCTTTTCTGGAAAAGGATCTTGAAGCAGCTCTTGACTCTTTTGACAACCTCTTTTGTCGACGATGTCTTGTTTTTGATTGTAGATTACATGGATGTTCACAGGATCTTGTCTTCCCTGCTGAGAAGCAACCTACATGGAACCCTCCTGATACTGAAAATGCACCCTGTGGGCCAAATTGTTTCCGATCGGTACTTAAGTCGGAAAGATTTGCCAAAACATCCTCTGCCCAGGCTGATGGTGAAGAGAAGTGCTCTGGTGGTGCTTTATCTAGGAAAAAATCTTCTGCTAAGAGGCGGATAAAATGCAGCCAAAGTGAAAGTGCTTCATCTAATGCAAAAAACATATCAGAGAGTAGTGACTCAGAGAATGGTCCTGGACGAGATGCTGTTTCAGCCTCCCACTCAGCACCTCCTAAAACTAAACCTGTGGGGAAAGGTGGAATTGGTAAAAGGAACAGTAAGCGAGTGGCAGAACGAGTCCTAGTATGCATGCAGAAACGGCAGAAGAAAACAATGGTTTCTGATTCTGATTCCATTAGTGAAGCTCTTGACCGTTCATCGAATGATATGGTCGCTGACCCTCATGCCATGAGCAGTGAAGACAACACGAGGAAAGAAGAGTTTGTAGATGACAATGTTTGTAAACCAGAAATCACAGATAATAAATCTTGGAAAGCTCTTGAAAAGGGGCTTTTAGAGAAAGGAATGGAGATTTTTGGTAGAAACAGTTGCTTAATAGCTAGGAATCTCTTAAATGGTCTAAAGACATGTTGGGATGTTTTCCAATACATAAATTGTGAAGATGGAAAGATGTCTGGTCCTCCTGGGGATGTTGCAAATTCCCTCATGGAAGGCTATTCCAAGGGTAATAATGAAGTGAGACGAAGGTCTAGATTCTTACGTAGAAGAGGAAGAGTCCGTCGATTGAAGTATACCTGGAAATCTGCTGCTTATCATTCAATTAGGAAAAGGATTACAGAGAGAAAGGATCAGCCCTGCCGGCAGTATAATCCTTGTGGTTGCCAATCAGCTTGTGGAAAGCAGTGTCCTTGTCTTCAAAATGGAACCTGCTGTGAGAAGTATTGTGGATGCCCCAAGAGCTGCAAGAATCGATTTCGTGGCTGTCATTGTGCTAAGAGTCAATGTAGAAGTCGTCAATGTCCATGCTTTGCTGCAGATAGGGAATGTGATCCAGATGTTTGTAGGAATTGTTGGGTCAGTTGTGGCGATGGTACACTTGGGATTCCTAGCCAAAGAGGGGACAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGAAGGTCTGATGTATCAGGCTGGGGAGCCTTCTTAAAGAATAGTGTTGGTAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTGATTTCTCATCGGGAAGCAGATAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTCTTTAATTTGAACGATCAGTTCGTTCTTGATGCTTACCGAAAGGGTGATAAATTAAAGTTTGCGAACCATTCTCCTGATCCAAATTGCTATGCAAAGGTTATTATGGTTGCTGGAGATCATAGGGTAGGCATTTTTGCCAAGGAACGGATTTGTGCTGGGGAGGAACTGTTCTATGATTACCGTTATGAACCCGATAGGGCTCCTGCATGGGCTCGGAAGCCAGAGGCATCTGGATCGAAAAAAGAGGACGGGGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA 2589 0.4307 MASKPSPSSSPSSSRSEPLVDPSANKAEAASPTVKDVLLVIDSLKKQVAVERIVYVKKRIDENRQKLVGVTNHLCTMSTERRNCSITDMNRSLDLLTKRQKDAIDMHNGVHASNGDVESNGYHDDGHGSTAVLLGSNVAVKNAVRPIKLPEVKKLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIMEDEEEKREFIESEDYILRMTVKEFGLTDVVLESLAQCFSRNTSEIKARYEALSIQDNAGGCSKAGDSEENSQSGNSFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQPTWNPPDTENAPCGPNCFRSVLKSERFAKTSSAQADGEEKCSGGALSRKKSSAKRRIKCSQSESASSNAKNISESSDSENGPGRDAVSASHSAPPKTKPVGKGGIGKRNSKRVAERVLVCMQKRQKKTMVSDSDSISEALDRSSNDMVADPHAMSSEDNTRKEEFVDDNVCKPEITDNKSWKALEKGLLEKGMEIFGRNSCLIARNLLNGLKTCWDVFQYINCEDGKMSGPPGDVANSLMEGYSKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERICAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01968 862 Pfam CXC domain 651 682 IPR041355 -
Pumo8g01968 862 ProSiteProfiles CXC domain profile. 599 698 IPR026489 -
Pumo8g01968 862 MobiDBLite consensus disorder prediction 1 20 - -
Pumo8g01968 862 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 862 IPR025778 GO:0031519
Pumo8g01968 862 MobiDBLite consensus disorder prediction 372 428 - -
Pumo8g01968 862 Gene3D SET domain 613 830 IPR046341 -
Pumo8g01968 862 SMART set_7 713 834 IPR001214 GO:0005515
Pumo8g01968 862 Pfam SET domain 724 827 IPR001214 GO:0005515
Pumo8g01968 862 Coils Coil 195 215 - -
Pumo8g01968 862 ProSiteProfiles SET domain profile. 713 828 IPR001214 GO:0005515
Pumo8g01968 862 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 30 860 IPR045318 GO:0006338|GO:0042054
Pumo8g01968 862 SUPERFAMILY SET domain 587 833 IPR046341 -
Pumo8g01968 862 MobiDBLite consensus disorder prediction 378 405 - -
Pumo8g01968 862 MobiDBLite consensus disorder prediction 836 862 - -
Pumo8g01968 862 MobiDBLite consensus disorder prediction 1 28 - -
Pumo8g01968 862 CDD SET_EZH 713 829 - -
Pumo8g01968 862 SMART CXC_2 647 684 IPR033467 -
Pumo8g01968 862 FunFam Putative histone-lysine N-methyltransferase EZH2 613 830 - -
Pumo8g01968 862 MobiDBLite consensus disorder prediction 836 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01968 Pumo-Chr8 56298999 56308970 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01968 702 831 C2H2 Transcription Factor Family AT2G23740 27.211 9.51e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pumo8g01968 SET 8.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01968 - K11430 gmx:100799832 1641.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01968 8 56298999 56308970 Pumo8g01968 8 56298999 56308970 ECH