Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01965 ATGACTATCATTAAGGAAGAGCAACAACCAAACCAAATCGCTGGCCACAAAGAGCTCGGGCACAAAACTCTCCTTCAGAGCGATGCACTCTATCAGTATATACTTGAAACTAGTGTGTTCCCAAGAGAGCATGAGAGCTTGAAGGAGCTACGAGAGTTGACGGAAAAACACCCTTGGAACCTGATGGCTACACCACCTGACGAAGGACAACTTCTAGGCATGCTACTTAAGCTTATCAATGCCAAGAACACCATGGAAATAGGCGTCTTCACTGGTTACTCCTTGCTTTCCACTGCCCTAGCCCTCCCCTCTGACGGAAAGATCTTAGCTCTGGATGTTAACCGGGAATATTATGAGCTGGGGCTACCTGTGATTCAAAAGGCCGGAGTAGCTCACAAGATTGACTTCAGAGAAGGACCTGCTCTTCCTCTCCTTGACGAACTCATCAAAGACGAAAAGAATAAGGGAACGTTCGATTTCATCTTCGTGGATGCTGACAAGGACAACTACTTGAACTACCACAACAGGGTGATTGAACTTGTGAAGGTTGGGGGATTGATCGGCTACGATAACACCCTATGGAACGGGTCCGTGGCGGCCCCACCCGATGCGCCTCTCATGGATTATATTAGGTATTATCGCGATTTTGTTATGGAGCTCAACAAAGCTCTTGCACTTGATTCAAGGGTCGAGATTTGCCAGATTCCCGTTGGTGATGGGATTACCCTGTGCCGCCGCATCATCTGA 747 0.4793 MTIIKEEQQPNQIAGHKELGHKTLLQSDALYQYILETSVFPREHESLKELRELTEKHPWNLMATPPDEGQLLGMLLKLINAKNTMEIGVFTGYSLLSTALALPSDGKILALDVNREYYELGLPVIQKAGVAHKIDFREGPALPLLDELIKDEKNKGTFDFIFVDADKDNYLNYHNRVIELVKVGGLIGYDNTLWNGSVAAPPDAPLMDYIRYYRDFVMELNKALALDSRVEICQIPVGDGITLCRRII 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01965 248 FunFam Caffeoyl-CoA O-methyltransferase 1 16 248 - -
Pumo8g01965 248 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 23 247 IPR002935 GO:0008171
Pumo8g01965 248 PANTHER O-METHYLTRANSFERASE-RELATED 21 247 - -
Pumo8g01965 248 Pfam O-methyltransferase 37 247 IPR002935 GO:0008171
Pumo8g01965 248 Gene3D Vaccinia Virus protein VP39 22 248 IPR029063 -
Pumo8g01965 248 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 246 IPR029063 -
Pumo8g01965 248 CDD AdoMet_MTases 89 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01965 Pumo-Chr8 56264716 56267047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01965 6 247 Monolignol Biosynthesis Gene Families AT4G34050 77.273 3.47e-147 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01965 K00588 - gmx:100799303 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01965 8 56264716 56267047 Pumo8g01965 8 56264716 56267047 ECH