Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01961 ATGCGGAGGTGCCTCTATGCAGTTCCAAGCCGACCTTCTCATCGCACGGAAGAGATGATGAGTCTTGAGAGAGATGCCCAAGAGTCTCAAATCTCTTCTGAAGATCTCTATAAAAAGCTGCAAGATGCAGTATCTGATGTTAAGAATGAGATAGCACAACATCTGGTGAATTTGGAAGTTTCTAACTACAGGATGGGCCCTGTTAAGAGGAAATACGCATTTGAACGATCTGAAATTCCTGCAGGTGAAAATTATGTGGTGAAAATCAATTATTCATTCAAGGATCCTGTACTCCCAGTAGATCTCAAAGGAAAAAGCTTCTGTGCTCTCTTAGGAACTGGTTGCAGTGCGCTTGAGCTTTTTTTGATTAAAAGAAAGATAAAGGGGCCTTCATGGCTACAGGTTTCAAAACCTTCTCCAAGCTCAGCTTCTCGAAGGGTTAGCTGGTGCAAATTTGAAGTGACCTGTTGA 471 0.4246 MRRCLYAVPSRPSHRTEEMMSLERDAQESQISSEDLYKKLQDAVSDVKNEIAQHLVNLEVSNYRMGPVKRKYAFERSEIPAGENYVVKINYSFKDPVLPVDLKGKSFCALLGTGCSALELFLIKRKIKGPSWLQVSKPSPSSASRRVSWCKFEVTC 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01961 156 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 1 156 - -
Pumo8g01961 156 Coils Coil 37 57 - -
Pumo8g01961 156 Gene3D - 2 128 - -
Pumo8g01961 156 FunFam DNA polymerase 2 128 - -
Pumo8g01961 156 Pfam DNA polymerase family B, exonuclease domain 46 156 IPR006133 -
Pumo8g01961 156 SUPERFAMILY Ribonuclease H-like 63 156 IPR012337 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01961 1 155 Core DNA Replication Machinery Family AT5G67100 56.129 8.88e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01961 K02320 - gmx:100798779 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01961 8 56214897 56216410 Pumo8g01961 8 56214897 56216410 ECH