Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01957 ATGAGGGACATGAAAACCTTACAAGAATTGGCGGCAAGTATTACGGATTGGAAGTCGCTTGAGAAGATATCTCGCAAACCCTTTACGCCTTCCATTTTGCATTTGGCAATATCACAACATGCACCCCAGTTATATAGCGAAGAAGAATTGGATCAATTAAATAATTTCAGCAAACTACTTTCAAGTGTTGAATCAAGGTTAAAGACAAACAATACTGATCAAAGGGTGACCAGAAAAAGACAAATTGAAGAGATGCCTAAAGAGGAAAGGGTCATGCCAATGAATAAAAAACCAAGAAATATAATTTTGACAAAGTACGGACCATCACTAGATTTGCCTGCAGAATTCAAGAATCGAGTCACCGAGTTGAATGGTTATGATCTTAAATTTCTCATGCACAAGAGACTCTTCAGCTCAGATGTGAAGCCGAATAGTAGTCGTCTGTCAATGCCAATAAACGAAATTATGTGTGATTTCCTCACAGAAACTGAGATTGCAGATTTGGATAAAAGAGAATCCACACGACTTCTTGGTGTGGAAGTGACTCTATTAGACCCATGTCTTAGAGAATTTACTTTACCATTGAAGAAGTGGAGCATGCAAAGGACGGACACCTACAATCTCACAAGGAATTGGAATAATATTGTATCTGCTAATAACTTTGAAGAAGACCAAGAACTCCAAATATGGTCTTTTAGGGTCGATAGCAAGCTATATTTTCTATTAAACAAATTGTGA 738 0.374 MRDMKTLQELAASITDWKSLEKISRKPFTPSILHLAISQHAPQLYSEEELDQLNNFSKLLSSVESRLKTNNTDQRVTRKRQIEEMPKEERVMPMNKKPRNIILTKYGPSLDLPAEFKNRVTELNGYDLKFLMHKRLFSSDVKPNSSRLSMPINEIMCDFLTETEIADLDKRESTRLLGVEVTLLDPCLREFTLPLKKWSMQRTDTYNLTRNWNNIVSANNFEEDQELQIWSFRVDSKLYFLLNKL 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01957 245 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 51 245 IPR005508 GO:0003677
Pumo8g01957 245 Gene3D - 122 244 IPR015300 -
Pumo8g01957 245 Pfam B3 domain-containing protein At2g31720-like 120 217 IPR005508 GO:0003677
Pumo8g01957 245 SUPERFAMILY DNA-binding pseudobarrel domain 132 241 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01957 Pumo-Chr8 56182156 56182982 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01957 122 244 B3 DNA Binding Superfamily AT1G05930 27.778 2.89e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01957 - - gmx:102663171 377.867