Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01942 ATGAGGACTAGGATCAAACTCTTAGATCTGGAGGTGGAGAGCGCGCAAGTTGAAACGTCGACGTGCAATGGTGGTGAAGAAATTGAGAGGAGAGAGATGAACCGTTCCAGCGAGCTTCGCGAAAATTCGCAGGAGCCGGAGCCAATGGAGATCAATTCTCACCGTGCCTTATCAACGGCAAAAACCATGCCTAACGAGTTGGAGCTCGAGGAATTCTTCGCTACCGCCGAGAAAGACATTCAGAAACGATTTCAAGACAAGTACAATTATGATATTGTTAAGGACGTGCCGCTGGAAGGACGCTTCGAGTGGGTTCAGTTGAAGCCATGA 330 0.4879 MRTRIKLLDLEVESAQVETSTCNGGEEIERREMNRSSELRENSQEPEPMEINSHRALSTAKTMPNELELEEFFATAEKDIQKRFQDKYNYDIVKDVPLEGRFEWVQLKP 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01942 109 PIRSF CKI_KRP_plant 1 109 IPR044275 GO:0004861|GO:0045736|GO:0051726
Pumo8g01942 109 Pfam Cyclin-dependent kinase inhibitor 64 107 IPR003175 GO:0004861|GO:0005634|GO:0051726
Pumo8g01942 109 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 9 108 IPR044275 GO:0004861|GO:0045736|GO:0051726
Pumo8g01942 109 MobiDBLite consensus disorder prediction 24 48 - -
Pumo8g01942 109 Gene3D p27 52 109 IPR044898 -
Pumo8g01942 109 MobiDBLite consensus disorder prediction 18 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01942 Pumo-Chr8 55948953 55951019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01942 64 109 Core Cell Cycle Gene Families AT1G49620 63.043 1.61e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01942 - - gmx:548057 192.971