Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01929 ATGATCACTGCAATTTCTATCGAGGATGTGAGAAGGGAAGTAAAAATATTGAGAGCTTTGACTGGACACAAGAATCTAGTACAATTCTATGATGCATATGAAGACCATGATAATGTCTATATAGTAATGGAGTTGTGTGAAGGAGGAGAGCTGTTAGACAGAATATTATCAAGAGGTGGGAAGTACACAGAGGAAGATGCAAAAGCTGTCCTGAGACAAATACTGAATGTTGTTGCTTTTTGCCATTTACAGGGTGTTGTACATCGTGATCTTAAACCTGAGAACTTCTTGTTTACATCCAAGGATGAGAACTCAAAGCTGAAGGCCATAGACTTTGGGTTGTCAGATTTTGTTAAACTAGATGAAAGACTTGATGATATTGTTGGCAGTGCATACTACGTGGCTCCCGAAGTTCTACATAGAGCTTACAGTACAGAGGCTGATGTCTGGAGTATTGGAGTGATTGCATATATTTTATTATGCGGCAGCCGTCCCTTTTGGGCCCGGACTGAGTCTGGTATCTTTCGTGCTGTATTGAAAGCTGATCCAAGTTTTGATGAACCTCCTTGGCCTTCTCTGTCAGATGAGGCAACCGATTTTGTTAAGCGATTACTAAATAAAGATCCACGGAAAAGAATGTCTGCAGCACAGGCGTTAAGTCATCCATGGATTAGAAACAAGGATGTAAAAGTACCTCTGGATATTCTAATATTCAAGCTCATGAAGGCATACATGCGTTCCTCATCTCTACGAAAAGCAGCTTTAAGGGCTCTGTCTAAGACGTTAACTGTTGATGAGCTATTTTATTTGAGGGAGCAGTTTGCACTTTTAGAGCCAAGCAAAAATGGCACTATTAGCTTGGAAAATATCAAAACGGTCTTGATGGTAAATGCAACAGATGCTATGAAGGAGTCACGCATACCTGACTTTTTGGCATCACTTAATGCATTACAATATAGAAGGATGGATTTTGATGAGTTCTGTGCAGCTGCACTTAGTGTTCATCAACTTGAAACACTTGACCAGTGGGAGCAAAATGCACGTTGTGCCTATGACCTTTTTGAAAAGGATGGAAACAAGGCCATAGTCATTGACGAACTAGCTTCGGAGCTTGGGCTTGGTCCATCTGTCCCTGTTCATGCCGTTCTCCATGATTGGATTCGGCACACTGATGGAAAATTAAGTTTCCTTGGATTTGTCAAACTGTTGCATGGCCCATCTAGAAGTCTTGCAAAAGCTCAATAA 1245 0.4104 MITAISIEDVRREVKILRALTGHKNLVQFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYTEEDAKAVLRQILNVVAFCHLQGVVHRDLKPENFLFTSKDENSKLKAIDFGLSDFVKLDERLDDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPSLSDEATDFVKRLLNKDPRKRMSAAQALSHPWIRNKDVKVPLDILIFKLMKAYMRSSSLRKAALRALSKTLTVDELFYLREQFALLEPSKNGTISLENIKTVLMVNATDAMKESRIPDFLASLNALQYRRMDFDEFCAAALSVHQLETLDQWEQNARCAYDLFEKDGNKAIVIDELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKAQ 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01929 414 Gene3D Phosphorylase Kinase; domain 1 3 50 - -
Pumo8g01929 414 Gene3D - 263 332 - -
Pumo8g01929 414 Gene3D Transferase(Phosphotransferase) domain 1 51 243 - -
Pumo8g01929 414 SUPERFAMILY Protein kinase-like (PK-like) 8 249 IPR011009 -
Pumo8g01929 414 ProSiteProfiles Protein kinase domain profile. 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01929 414 Gene3D - 244 402 - -
Pumo8g01929 414 FunFam CDPK-related kinase 1 2 50 - -
Pumo8g01929 414 SUPERFAMILY EF-hand 251 405 IPR011992 -
Pumo8g01929 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 86 98 IPR008271 GO:0004672|GO:0006468
Pumo8g01929 414 SMART serkin_6 2 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01929 414 FunFam CDPK-related kinase 1 259 332 - -
Pumo8g01929 414 CDD STKc_CAMK 1 223 - -
Pumo8g01929 414 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 390 - -
Pumo8g01929 414 Pfam Protein kinase domain 8 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01929 414 FunFam CDPK-related kinase 1 52 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01929 Pumo-Chr8 55785790 55791816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01929 1 414 EF-hand Containing Proteins AT3G50530 79.372 0.0 730
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo8g01929 Pkinase 6.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01929 K00924 - gmx:100794177 800.816