Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo8g01924 | ATGGTACTCTGCGACTTCTGGGAGCACACTAGTCTCGCTCAGAGTGAGAGAATAACACCCAAACCAAAACCAACTATCATGGACCTCAGCTTGGATTTGAGTTTGGGCTTTGTCCCCAAACCCCTTTCCCTGTTTTTCGGCAACGACGTTTCTGGGAACAGAGACAAGCCCGACAAACTGGCCACGCTCGATGCCTTCCTGCAGAGATTGGAGGAAGAATTGAGCAAGGTCCAGGCTTTCAAACGCGAGCTTCCTCTTTGCATGCTCCTCCTAAACGATGCTTTAGCGAGATTGAAGGAGGAAAAAACAAAGTGTTCGGGAATGCAAGATCCACCAATGAAAACCAGTTCTGGAGGAAATGAAAATGAAAGCTCTGAGAAGAAGAATTGGCTGAGTTCAGCACAGCTTTGGAGCACTCAAAAAACCAAATCGAGGAATGAGGAAGATGATAGGTCTGTGCCAGAGAACCCAATGAATAGAAAATCGTGTGTCCCCGAGAAGGAGGGTTCGCAAGTTCCGAGCTTTGGTTTGATGGCTCGTGCGTCTGAACTGAGTCATAGCAATTCCAAGAGTGTTTGTGGAGATACCAGTTCTGGCTCGTCTTTGCTCCGTGTTGAGGTACAGAGTCAGCCACAACCGCCGCAACATATGCAGCAGAATCCTAGGAAACAACGCCGGTGCTGGTCGCCGGAGCTTCATCGGCGCTTTGTTGACGCGCTTCAACAACTTGGTGGAGCACAAGTGGCCACCCCTAAACAGATTAGAGAACTGATGCAGGTGGAGGGCCTTACAAATGATGAAGTGAAAAGCCATTTGCAAAAGTACAGGCTTCATGTTAGGAGACTCCCAGCTTCTTCAGTTGGACAGGCTGATAATGGTTCATGGATGGTTCAAGATGAATGTGGGGATAAATCAAAGGGAAACATGTCACAGTCTGGTTCTCCACAAGGTCCTCTCACACCTCTGCTCCTAGGAGGAGGGTCTGCCAAGGGTCTCTCAAGCCCTGGACGGAACAGTGTGGATGCAGAAGATGAGCAATCAGATTGCCGGAATTGGAAAGGAGGGCTCCACCACCACCTTGAAGCTGATAATCACAGCCTCTAA | 1104 | 0.4918 | MVLCDFWEHTSLAQSERITPKPKPTIMDLSLDLSLGFVPKPLSLFFGNDVSGNRDKPDKLATLDAFLQRLEEELSKVQAFKRELPLCMLLLNDALARLKEEKTKCSGMQDPPMKTSSGGNENESSEKKNWLSSAQLWSTQKTKSRNEEDDRSVPENPMNRKSCVPEKEGSQVPSFGLMARASELSHSNSKSVCGDTSSGSSLLRVEVQSQPQPPQHMQQNPRKQRRCWSPELHRRFVDALQQLGGAQVATPKQIRELMQVEGLTNDEVKSHLQKYRLHVRRLPASSVGQADNGSWMVQDECGDKSKGNMSQSGSPQGPLTPLLLGGGSAKGLSSPGRNSVDAEDEQSDCRNWKGGLHHHLEADNHSL | 367 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo8g01924 | 367 | MobiDBLite | consensus disorder prediction | 142 | 156 | - | - | |
Pumo8g01924 | 367 | MobiDBLite | consensus disorder prediction | 287 | 353 | - | - | |
Pumo8g01924 | 367 | SUPERFAMILY | Homeodomain-like | 221 | 281 | IPR009057 | - | |
Pumo8g01924 | 367 | MobiDBLite | consensus disorder prediction | 304 | 318 | - | - | |
Pumo8g01924 | 367 | FunFam | Myb family transcription factor | 222 | 280 | - | - | |
Pumo8g01924 | 367 | Pfam | Myb-like DNA-binding domain | 225 | 276 | IPR001005 | - | |
Pumo8g01924 | 367 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 220 | 280 | IPR017930 | - | |
Pumo8g01924 | 367 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 223 | 278 | IPR006447 | GO:0003677 | |
Pumo8g01924 | 367 | MobiDBLite | consensus disorder prediction | 109 | 141 | - | - | |
Pumo8g01924 | 367 | MobiDBLite | consensus disorder prediction | 102 | 172 | - | - | |
Pumo8g01924 | 367 | Coils | Coil | 63 | 83 | - | - | |
Pumo8g01924 | 367 | Gene3D | - | 222 | 279 | - | - | |
Pumo8g01924 | 367 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 46 | 352 | IPR044787 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo8g01924 | Pumo-Chr8 | 55708343 | 55710113 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo8g01924 | 27 | 273 | G2-like Transcription Factor Family | AT4G37180 | 42.366 | 6.35e-53 | 175 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Pumo8g01924 | Myb_DNA-binding | 1.5e-06 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo8g01924 | - | - | gmx:100785723 | 603.208 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pumo4g02015 | 4 | 27603327 | 27606186 | Pumo8g01924 | 8 | 55708343 | 55710113 | PCT |