Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01922 ATGGATCGGCCGGCGACCGGAGCAGGCGTGGACATGCCGATCATGCACGATAGCGACCGCTACGATTTCGTTCGCGATATTGGGTCCGGGAATTTCGGCGTGGCTAGGCTTATGAGGGATAAGCAAACGCAAGAGCTTGTTGCTGTCAAGTATATTGAACGCGGAGATAAGATTGATGAAAATGTTAAAAGAGAAATAATCAATCACAGGTCTCTAAGACATCCTAACATTATCAGGTTTAAGGAGGTCATTTTAACACCTACTCATCTGGCCATTGTAATGGAATATGCATCTGGAGGAGAACTATTTGAGCGAATCTGCAATTTAGGGCGTTTTAATGAGGATGAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTATTGTCATGCAATGGAAGTGTGTCACCGGGACTTGAAGTTGGAAAATGCTTTGTTGGATGGAAGCCCAGCACTCCATTTGAAGATATGTGATTTTGGATACTCCAAGTCTTCGGTGCTTCATTCACAACCTACGTCAACTGTAGGAACTCCAGCATATATTGCTCCAGAAGTATTGCTGAAGCAAGAGTATGATGGCAAGACTGCAGATGTCTGGTCATGTGGAGTAACCTTATATGTGATGCTAGTGGGATCATATCCTTTTGAAGATCCTAATGATCCAAAGGATTACCGGAAGACAATTCAGAGGGTTCTCAGTGTCCAGTATTCCATTCCAGACGTTGTTCAAATATCTCCCGAGTGTCGCCACCTTATCTCAAGGATCTTTGTTTTTGAACCTGCAGAGAGAATCACTATTCCTGAAATATTGAAAAATGAATGGTTTCTGAAGAATCTCCCTCCTTACTTGATGGATGAGAAGATCATGGGTAACCAATTTGTAGAGTCAGATCAGCCCATGCAGAGCATTGATACGATCATGCAGATTATTTCAGAAGCTACCATACCAGCTGCGGGGACCTATTCTTTAGACCAGTTTATGGCAGATAACATAATAGATGATGACATGGATGAATTAGACTCTGACTTTGAGCTTGATGTAGATAGCAGTGGGGAGATAGTGTATGCCATATAA 1080 0.4287 MDRPATGAGVDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKQTQELVAVKYIERGDKIDENVKREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGELFERICNLGRFNEDEARFFFQQLISGVSYCHAMEVCHRDLKLENALLDGSPALHLKICDFGYSKSSVLHSQPTSTVGTPAYIAPEVLLKQEYDGKTADVWSCGVTLYVMLVGSYPFEDPNDPKDYRKTIQRVLSVQYSIPDVVQISPECRHLISRIFVFEPAERITIPEILKNEWFLKNLPPYLMDEKIMGNQFVESDQPMQSIDTIMQIISEATIPAAGTYSLDQFMADNIIDDDMDELDSDFELDVDSSGEIVYAI 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01922 359 SUPERFAMILY Protein kinase-like (PK-like) 14 318 IPR011009 -
Pumo8g01922 359 FunFam Serine/threonine-protein kinase SRK2E 12 96 - -
Pumo8g01922 359 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Pumo8g01922 359 SMART serkin_6 21 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01922 359 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Pumo8g01922 359 Gene3D Transferase(Phosphotransferase) domain 1 97 283 - -
Pumo8g01922 359 ProSiteProfiles Protein kinase domain profile. 21 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01922 359 PANTHER SERINE/THREONINE KINASE 20 300 - -
Pumo8g01922 359 Pfam Protein kinase domain 21 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01922 359 FunFam Serine/threonine-protein kinase SRK2E 97 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01922 Pumo-Chr8 55682643 55688743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01922 20 281 CBL-interacting serine-threonine protein kinases AT5G25110 44.161 2.29e-68 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pumo8g01922 Pkinase 9.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01922 K14498 - gmx:100783967 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02016 4 27644420 27649658 Pumo8g01922 8 55682643 55688743 PCT