Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01910 ATGTCATTTTCGTTGTTCGCCACGCCGCAGCAACAGCAACCGCAGCAGCAGTCTCCTTTTCAGCCACAGCAAACTAGTTTGTTCCTTCCGCAGCAGCAGCAGCAACAACAACAGCAACAATTTCAACCACAACAGCAGCAACAGCAGCAGCCGCAACAGCAGTTGTTTTTGTTCACTAACGATAGAACTCCCGCTAGTTATAGTACCAATTGGGCGGATCTACATCCTGATTCCCAGAAGATTCTCCTTCTGATCGAGGAGCGGATATTGGAGTATAGGGATGAAAGCCAGAGACTAGATCAGTGTAGTCGTCTCTATGATTCTTCGGTTTCCAACGATGGATTTGAGCTTGATGCAGGACATATTGTTCAGGAACTTGGTGGAATTAGCACTGCTATGGAACGACAGAAAACTCTGCTACAGGAACTGATGTCCACTGTTAAGGATATGTTACGCAATACAGAGGTTGCTGTTCGTTCCTTTATGATGCTACGCCCTAGGTTCCTTCATCCCAGTGGGGGTACATCAAGTGCCACCGCCCCATCACAGACTCCTGGAGCATCTATAGCACCTAGTTTGAGTAGCCAACCAACAACTGCATCTATAGTGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAAGAAACCATCTCCATTTTTACAGCAAACAGTTTTAAGATTTGAAAAGTATCTTGGTGAGTGTCATCAGTGGATTGAAGAGTTGGAGCAGCTGCTTCTCTTGGACTCTGAGAGAAATGCTTCCAGTAATGGATCCTCATTATTGCAATCTCTTCCCAAGATCATGACAAATGTGCATGACTTTTTTGTTCACGTGGCTGCGAAGGTGGAGAGCATTCATCAGTACATTGAATCAATGAAATCAGCATACCTAGCTGATCAGCGTCGCCAGGGGGAGGTGAATGATCCATTTTTGGAGGCAGATCGGCGAGAAACTGCAAGACAAGAAGCCGCCTCAAAAAGAGTTCATCCGACATTGCATTTACCTGCAAATTCACAACCCTCAACTCAAGTTGCTGGGTTGTTTTCCAGTTCAGGGACTCAAGCAGCATTGACTGCCCCACAGACATCTGCAGCAACTTCATCTTTGTCACCAGGAAGTGGATTCTCTCTTTTTAGCACACCATCTTCTGCTCCATCGTCTTCTATGTTGTCATCTCTGTTTACAACACCAACTCCTGCCCCAGGACCTCAAACCTCACTTTTTGGTTCTACAACATCTGTACCTGGTCCTGCATCAACTCCCTCTCTGTTTGGTAATACTACTCCAGTGTTTAGTACGACTCCAGCTACAAATTCACTCTTTTCAACTCCATTTGTTTCAGGTGCTGCAACAGGATCTGGGGCTAGCTTTGGACCTGGATCGAAAAATCCACGGGCAAAATCCAGAACCGCCCGACGCTAA 1422 0.4606 MSFSLFATPQQQQPQQQSPFQPQQTSLFLPQQQQQQQQQQFQPQQQQQQQPQQQLFLFTNDRTPASYSTNWADLHPDSQKILLLIEERILEYRDESQRLDQCSRLYDSSVSNDGFELDAGHIVQELGGISTAMERQKTLLQELMSTVKDMLRNTEVAVRSFMMLRPRFLHPSGGTSSATAPSQTPGASIAPSLSSQPTTASIVPVFDFYSGLPKKPSPFLQQTVLRFEKYLGECHQWIEELEQLLLLDSERNASSNGSSLLQSLPKIMTNVHDFFVHVAAKVESIHQYIESMKSAYLADQRRQGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQAALTAPQTSAATSSLSPGSGFSLFSTPSSAPSSSMLSSLFTTPTPAPGPQTSLFGSTTSVPGPASTPSLFGNTTPVFSTTPATNSLFSTPFVSGAATGSGASFGPGSKNPRAKSRTARR 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01910 473 Coils Coil 133 153 - -
Pumo8g01910 473 MobiDBLite consensus disorder prediction 450 473 - -
Pumo8g01910 473 MobiDBLite consensus disorder prediction 307 327 - -
Pumo8g01910 473 MobiDBLite consensus disorder prediction 1 52 - -
Pumo8g01910 473 MobiDBLite consensus disorder prediction 172 193 - -
Pumo8g01910 473 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 6 461 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Pumo8g01910 473 MobiDBLite consensus disorder prediction 332 346 - -
Pumo8g01910 473 MobiDBLite consensus disorder prediction 307 346 - -
Pumo8g01910 473 Gene3D - 215 305 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01910 15 473 NAC Transcription Factor Family AT4G37130 57.282 1.73e-177 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01910 K14307 - gmx:100776992 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01910 8 55596921 55602210 Pumo8g01910 8 55596921 55602210 ECH