Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01884 ATGGAATTAGCTCAAGCGTGGTTCTTGTTTATTACCAGCTTGTTTTTCTTTTGGGTATTGCATTGGCTTGCAAAGAAGTATTATTACAACTACAAGCCAAAAACCACCCTTTCTCACAAACTACCCCCTGGCCCAAAGAAGCTACCTCTCATAGGGAACCTGCATCAAGTAGCAATAGCAGGTTCACTTCCACATCGTGCTCTCCGAGACCTAGCCAATAAATATGGACCTGATCTCATGCACCTTCAACTTGGTGAAATTTCTTCAGTGGTTGTATCCTCCCCCAAGATGGCCAAGGAGATTATGAAAACCCATGACCTTGCTTTCGTGCAGAGGCCCCAATTACTTCCTGCTCAAATTTTGACCTATGGCCAAACCAATATTGCTTTTGGTCCATATGGAGATTTATGGAGACAAATGAAGAAAATATTTGTCTCAGAGCTTCTAAGTGCCAAGAGAGTTCAGTCTTTCTCTAATATTAGAGAAGACGAGACAGCCAAATTTATAGAATCAATTCGAGCATCAGCAGGTTCACCAATCAATCTTACCAGTAGAATTTACTCCTTGATAAGTTCTTCTGTTTCCAGGATAGCATTTGGTAACAAGTGTAAGGATCAGGATGAGTTTGTGGCTTTGGTTAAAAAAATGATAGTAGCAGTGGCAGGATTTGAGCTTGACGATTTGTTTCCTTCCATGAAACTGCATCTCATAACTGGAAGGAAGATCAAATTGGAGAAGTTGCAACAGCAGCTTGACAACATCGTCGATAACATTCTCAAAGAGCATCAAGAAAAGCGCGAAAGGGTTGACATAGAAGAGGAAGATCTTGTTGATGTTCTATTGAGAATCCAACAAAGTGACAGTCTCGAGATCAAAATTACTACCACAAACATCAAAGCTATGATATTGGACGTATTTACTGCTGGAACCGATAGTTCAGCATCAACACTTGAATGGGCAATGACAGAAATAATGAGAAATCCAAGAGTGAGGGAGAAAGCACAGACCGAAGTAAGACAAGCATTTAGGGAATTGGAAACAATCCATGAAGCAGATGTAGAGGAACTTACATACTTAAAGTTGGTGATCAAAGAGACACTAAGGTTACACACTCCTTCTCCTTTATTGCTCCCTAGAGAATGCTCTGAGCGAACCATCATTGATGGGTATGAAATACCCATCAAGACTAAAGTCATGGTAAACGTGTGGGCAATTGCAAGAGATCCTCTATATTGGACTGATGCTGAGAGGTTTGTCCCAGAGAGATTTGATGGTAGCTCTATCGATTTCAAAGGGAATAACTTTGAGTATCTCCCTTTTGGAGGAGGAAGGAGAATGTGCCCAGGCATAATATTTGGTTTAGCCAACATTATGCTTCCACTGGCTCTATTACTCTATCACTTCAACTGGGAACTCCCAAATGAGATGAAACCTGAGGATATGGATATGGCTGAAAACTTCGGATTGACACTTGGAAGGAAAAGTAAGTTGTGTTTGATTCCCGTTGTTAACGATTTTTGA 1521 0.4076 MELAQAWFLFITSLFFFWVLHWLAKKYYYNYKPKTTLSHKLPPGPKKLPLIGNLHQVAIAGSLPHRALRDLANKYGPDLMHLQLGEISSVVVSSPKMAKEIMKTHDLAFVQRPQLLPAQILTYGQTNIAFGPYGDLWRQMKKIFVSELLSAKRVQSFSNIREDETAKFIESIRASAGSPINLTSRIYSLISSSVSRIAFGNKCKDQDEFVALVKKMIVAVAGFELDDLFPSMKLHLITGRKIKLEKLQQQLDNIVDNILKEHQEKRERVDIEEEDLVDVLLRIQQSDSLEIKITTTNIKAMILDVFTAGTDSSASTLEWAMTEIMRNPRVREKAQTEVRQAFRELETIHEADVEELTYLKLVIKETLRLHTPSPLLLPRECSERTIIDGYEIPIKTKVMVNVWAIARDPLYWTDAERFVPERFDGSSIDFKGNNFEYLPFGGGRRMCPGIIFGLANIMLPLALLLYHFNWELPNEMKPEDMDMAENFGLTLGRKSKLCLIPVVNDF 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01884 506 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01884 506 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01884 506 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01884 506 Coils Coil 244 275 - -
Pumo8g01884 506 PANTHER OS08G0105600 PROTEIN 67 503 - -
Pumo8g01884 506 CDD CYP71-like 74 497 - -
Pumo8g01884 506 Gene3D Cytochrome P450 35 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01884 506 Coils Coil 331 351 - -
Pumo8g01884 506 SUPERFAMILY Cytochrome P450 42 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01884 506 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01884 506 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01884 506 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01884 506 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01884 506 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01884 506 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01884 506 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01884 506 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01884 506 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01884 506 Pfam Cytochrome P450 42 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01884 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Pumo8g01884 506 FunFam Cytochrome P450 71D8 34 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01884 Pumo-Chr8 55237081 55240392 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01884 29 502 Cytochrome P450 AT3G26300 42.562 3.82e-133 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01884 - K15472 gmx:100785175 840.491