Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01882 ATGACCACCCAACACGTCAAAGCTTTGGTTTCGGATATATTTGTTGGTGGAATTGATACTGCAGCATCGATCATGGATTGGGCCATGTCAGAAATGATGAGAAACCCAAAAGTGAGACAAAAGGCACAAGCTGAGCTAAGACAAGCATTTAAAGGAAAGAGAATAATCCATGAAACTTATTTAGAGGAAATAAGTTATTTGAAGTTGGTGATCAAAGAGACATTGAGGCTACATCCTCCTGTTCCTTTGTTGCTTCCTAGAGAATGCTCTGAACTAACCATGATTGATGGGTACGAAATACCTGTCAAGACTAAAATAATGGTAAATGTATGGGCAATGGGAAGAGATCCCCAATATTGGGATGATGCTGAGAAGTTTATGCCAGAGAGGTTTGATGGTAGTTCTATTGATTTCAAAGGGAATAACTTTGAGTATCTTCCATTTGGGGCAGGAAGAAGAATGTGTCCAGGTATGTCATTTGGTTTAGCCTCCCTTATGCTTGCTCTGGCTCTGCTACTTTATCATTTCAACTGGGAACTTCCAAATGCGATGAAACCTGAGGATTTGGATATGACTGAAAACTTTGGATTGGCAATTAGAAGGAAGGGCGAGTTGTGTTTGATTCCCACCGTTTACGATCTCTAG 645 0.4047 MTTQHVKALVSDIFVGGIDTAASIMDWAMSEMMRNPKVRQKAQAELRQAFKGKRIIHETYLEEISYLKLVIKETLRLHPPVPLLLPRECSELTMIDGYEIPVKTKIMVNVWAMGRDPQYWDDAEKFMPERFDGSSIDFKGNNFEYLPFGAGRRMCPGMSFGLASLMLALALLLYHFNWELPNAMKPEDLDMTENFGLAIRRKGELCLIPTVYDL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01882 214 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 148 157 IPR017972 GO:0005506|GO:0016705
Pumo8g01882 214 PRINTS E-class P450 group I signature 25 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01882 214 PRINTS E-class P450 group I signature 5 22 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01882 214 PRINTS E-class P450 group I signature 145 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01882 214 PRINTS E-class P450 group I signature 155 178 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01882 214 PRINTS E-class P450 group I signature 109 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01882 214 PRINTS E-class P450 group I signature 68 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01882 214 Pfam Cytochrome P450 1 199 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01882 214 PANTHER OS08G0105600 PROTEIN 1 212 - -
Pumo8g01882 214 SUPERFAMILY Cytochrome P450 1 208 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01882 214 Gene3D Cytochrome P450 1 207 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01882 214 FunFam Predicted protein 14 207 - -
Pumo8g01882 214 PRINTS P450 superfamily signature 69 80 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01882 214 PRINTS P450 superfamily signature 16 33 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01882 214 PRINTS P450 superfamily signature 155 166 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01882 214 PRINTS P450 superfamily signature 146 155 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01882 Pumo-Chr8 55226530 55227820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01882 1 212 Cytochrome P450 AT3G26330 52.358 2.12e-78 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01882 - K15472 aprc:113870280 359.762