Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01878 ATGCAGATTGCATTGGATGTGGCCACAGGACTTGACTATCTTCACAGTTTCACTTCTCCTCCTCATATCCACAAGGATATTAATAGTAGTAACATTCTTCTGGATGGTGATTTCAGGGGAAAGGTTGCGAACTTAAGCCTTGCTAGGTGTTTGGAAGGAGGGGATGATCAATTTCCCGCGACAAGGCACATTGTTGGGACAAGAGGCTATATGGCTCCAGAGTATTTGGAAAATGGTCTTGTGTCTACAAAGCTTGATGTGTATGCTTTTGGGGTACTGATGCTGGAAATGGTCACTGGAAAAGAGGTTGCTGCTATTTTAACTGAAGATGAGACAAAGTTGTCACATGTTTTAAGTGGCATACTTGGTGAGGAAAGTGGCAAGGAGAGGTTGAAGGAGTTTGTGGATCCCTCTTTGGGAGAAAATTGTCCATTGGAACTTGCTATGTTTGTGATTGAAATGATTGATAATTGCATAAAGACAGATCCGGCAAGTCGCCCTAGTGTGCATGAGATTGTGCAATCTCTGTCAAGAACCCTGAACTTTTCACTGAGTTGGGAAAGGTCAATGAATGTCCCACGAAACTAG 588 0.4303 MQIALDVATGLDYLHSFTSPPHIHKDINSSNILLDGDFRGKVANLSLARCLEGGDDQFPATRHIVGTRGYMAPEYLENGLVSTKLDVYAFGVLMLEMVTGKEVAAILTEDETKLSHVLSGILGEESGKERLKEFVDPSLGENCPLELAMFVIEMIDNCIKTDPASRPSVHEIVQSLSRTLNFSLSWERSMNVPRN 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01878 195 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 1 188 - -
Pumo8g01878 195 FunFam PTI1-like tyrosine-protein kinase 3 1 190 - -
Pumo8g01878 195 Gene3D Transferase(Phosphotransferase) domain 1 1 189 - -
Pumo8g01878 195 Pfam Protein kinase domain 3 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01878 195 SUPERFAMILY Protein kinase-like (PK-like) 2 176 IPR011009 -
Pumo8g01878 195 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01878 Pumo-Chr8 55177269 55177856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01878 1 195 Receptor kinase-like Gene Family AT2G33580 47.500 2.14e-61 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pumo8g01878 Pkinase 8.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01878 - - gmx:100815842 378.252