Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01862 ATGCAAGATAATATTCAAGCCTTATCTATCCCAGTTGGACTTCCACCTCACCGTTTTCAGCCATGGAAACAGTACGTTGTCTGGCATGCGTACTTGTTCAAGATACCACTGGCACCTTCATATCCTGATTGGTCAAGCTCGATGCAGGCTTACTATGCTGCTGGAGCCACTCCGCCTGCATTTTTTGCCTCAACTGTTGCTTCCCCAACTCCCCATCCCTATATGTGGGGAAGCCAGCATCCTCTAATTCCACCTTATGGTACTCCTGTTCCATATCCAGCTATATATCCTCCTGGGAATGTCTATGCTCATCCTAGCATGGCAACGACCCTGAGCACCACACAGCATGGTACAGAGTTTGTAGGAAAGGGGCCTAATGGAAAAGATCGGGTTTCTGCCAAAAGTTCAAAGGGTATGTCTGTAAATACTGGTTCCAAAGCAGGAGACAATGGAAAGGCAGGCTCAGGGTCCGGAAATGATGGCGTCTCACAAAGTGCTGAAAGTGGTTCAGAGGGATCTTCAGATGCTAGTGATGAGAATACTAACCAACAGGAATCAGCTACAAACAAGAAAGGGAGTTTTGACCAAATGCTTGTTGATGGAGCCAATGCACGGAACAATTCTGTTAGCGCCGTTCCTCAATCTTCAGTACCTGGAAACCCCGTCGTGTCAATGTCTGCAACCAGTCTTAATATTGGAATGGACTTGTGGAATGCATCTCCTGCTAGTGCCGAAGCTGCAAAAATGAGACACAATCAATCTGCTGCCTCTGGAGCTGTTACTCCTCCAACCATAATGGGACGTGAAGTCGCACTTGGTGAACCCTGTATACAAGACGAACGTGAACTAAAAAGACAGAAGAGGAAACAGTCTAATAGAGAGTCAGCTAGGAGGTCAAGACTACGCAAGCAGGTACTTTGGAAATTCTACTTCATGCTCCCTAGTCCCTTCTTTAAGTGTGAGACTAAGCCAAGTGTCCTGTCCCTAATTGCTTGA 996 0.4669 MQDNIQALSIPVGLPPHRFQPWKQYVVWHAYLFKIPLAPSYPDWSSSMQAYYAAGATPPAFFASTVASPTPHPYMWGSQHPLIPPYGTPVPYPAIYPPGNVYAHPSMATTLSTTQHGTEFVGKGPNGKDRVSAKSSKGMSVNTGSKAGDNGKAGSGSGNDGVSQSAESGSEGSSDASDENTNQQESATNKKGSFDQMLVDGANARNNSVSAVPQSSVPGNPVVSMSATSLNIGMDLWNASPASAEAAKMRHNQSAASGAVTPPTIMGREVALGEPCIQDERELKRQKRKQSNRESARRSRLRKQVLWKFYFMLPSPFFKCETKPSVLSLIA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01862 331 CDD bZIP_plant_GBF1 285 304 IPR045314 GO:0003700|GO:0006355
Pumo8g01862 331 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 287 302 IPR004827 GO:0003700|GO:0006355
Pumo8g01862 331 MobiDBLite consensus disorder prediction 116 194 - -
Pumo8g01862 331 PANTHER G-BOX-BINDING FACTOR 3-RELATED 38 307 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pumo8g01862 331 MobiDBLite consensus disorder prediction 133 193 - -
Pumo8g01862 331 Pfam G-box binding protein MFMR 37 107 IPR012900 -
Pumo8g01862 331 Pfam bZIP transcription factor 280 304 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01862 Pumo-Chr8 54916492 54923597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01862 34 305 bZIP Transcription Factor Family AT4G36730 49.817 7.65e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo8g01862 MFMR 6.4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01862 K09060 - gmx:100808533 473.011