Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01842 ATGTCTGACTCACTCCTAACTTTCTATTCTCTTTCATCCATTCTTGCTCTTCTCCCAATCTTCATCTTCATTCTCATCAAAAGAAAGCAAAGCAAACCCAGGCTCAACCTCCCCCCAGGTAACATGGGTTGGCCATTTCTTGGTGAAACCATTGGCTATTTGAAGCCTTATTCTGCCACCACAATAGGGGAATTCATGGAGCAACACATAGCAAGGTATGGTACAATTTACAAGTCAAAACTGTTTGGGGAGCCAGCAATAGTGTCAGCAGATGCAGGACTCAACAGGTTCATTCTACAGAACGAAGGGAAATTGTTCGAGTGCAGCTATCCCAGAAGCATTGGTGGAATACTAGGGAAATGGTCCATGTTGGTCTTAGTTGGTGACATGCATAGAGACATGCGGGTTATATCACTCAACTTTCTAAGCCACGCCAGGCTCAGAACACACCTCTTGAAAGAAGTGGAAAAGCACACCCTCCTTGTTCTAAACTCTTGGAACCAAAATTCCACATTCTCGGCCCAAGATGAAGCTAAGAAGTTCACCTTCAATTTGATGGCTAACCATATCATGAGCATGGATCCTGGGGATATCGAGACAGAGCAACTAAAGAAAGAGTACGTCACTTTCATGAAAGGGGTGGTATCCGCGCCATTGAATTTACCTGGAACTGCATACCGAAAGGCATTGAAGTCTAGGTCCACCATACTGAAGTTCATAGAAGGGAAAATGGAAGAGAGAGTTAGAAAAATCCAAGAGGGGAATGAGAGTTTGGAGGAGGATGATCTTCTAAACTGGGTTTTGAAGCATTCGAATCTTTCAACGGAGCAAATTCTGGACTTGATTCTCAGCTTGCTCTTCGCGGGCCATGAAACTTCGTCGGTAGCCATAGCTCTAGCCATTTACTTCTTGCCCGGTTGTCCTCAAGCTATACAACAGTTAAGGGAAGAACACAGAGAAATTGCCAGAGCCAAAAAGCAAGCAGGGGAAGTTGAACTCACTTGGGAGGACTACAAACGAATGGAATTTACTCATTGTGTTGTGAACGAGACACTTAGGTTGGGAAATGTTGTGAGGTTTCTCCACAGGAAGGCTGTGAAAGATGTTAACTATAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTTCCGGTGATTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGAACAATGGTAGTCGTGGAAGTTGTTCAAGCAAGAGCACAGCAAACAATAACTTTCTTCCGTTCGGGGGAGGACCACGACTATGTGCAGGATCAGAGTTAGCTAAGCTTGAAATGGCTGTTTTCATTCACCATCTCATTCTCAACTACCATTGGGAATTGGCTGATTCCGATCAAGCTTTTGCTTACCCTTTTGTCGACTTCCCCAAAGGTCTACCCATTAGAGTCCAAGCCCACTCTTTGCTTTGA 1470 0.4463 MSDSLLTFYSLSSILALLPIFIFILIKRKQSKPRLNLPPGNMGWPFLGETIGYLKPYSATTIGEFMEQHIARYGTIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLKEVEKHTLLVLNSWNQNSTFSAQDEAKKFTFNLMANHIMSMDPGDIETEQLKKEYVTFMKGVVSAPLNLPGTAYRKALKSRSTILKFIEGKMEERVRKIQEGNESLEEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPGCPQAIQQLREEHREIARAKKQAGEVELTWEDYKRMEFTHCVVNETLRLGNVVRFLHRKAVKDVNYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQHFNPWRWQNNGSRGSCSSKSTANNNFLPFGGGPRLCAGSELAKLEMAVFIHHLILNYHWELADSDQAFAYPFVDFPKGLPIRVQAHSLL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01842 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Pumo8g01842 489 SUPERFAMILY Cytochrome P450 34 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01842 489 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01842 489 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01842 489 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01842 489 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01842 489 PRINTS E-class P450 group I signature 345 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01842 489 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01842 489 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01842 489 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01842 489 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01842 489 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01842 489 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01842 489 CDD CYP90-like 69 483 - -
Pumo8g01842 489 Coils Coil 307 334 - -
Pumo8g01842 489 FunFam Cytochrome P450 90B1 27 485 - -
Pumo8g01842 489 PANTHER CYTOCHROME P450 26 33 464 - -
Pumo8g01842 489 Pfam Cytochrome P450 38 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01842 489 Gene3D Cytochrome P450 26 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g01842 489 Coils Coil 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01842 Pumo-Chr8 54646687 54651416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01842 27 408 Cytochrome P450 AT3G50660 76.675 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01842 K09587 - gmx:100789515 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01842 8 54646687 54651416 Pumo8g01842 8 54646687 54651416 ECH
Pumo8g01842 8 54646687 54651416 Pumo4g02103 4 29980116 29988305 PCT