Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01819 ATGGCATCATCTTGGACTCCAAGGCAAAACAAACTATTTGAAGAGGCCCTTGCTATATATGATAGGGAAACTCCTGACAGGTGGCAGAATGTGGCAAGAGTAGTGGGAAAATCCGTAGAGGATGTTAAAAGGCACTATGAAATCCTCAAAGAAGATATCAAGCGCATTGAGCGTGGACAGATCCCATTACCTAACTACACAGGTTCTTGA 210 0.4333 MASSWTPRQNKLFEEALAIYDRETPDRWQNVARVVGKSVEDVKRHYEILKEDIKRIERGQIPLPNYTGS 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01819 69 CDD SANT 4 50 IPR001005 -
Pumo8g01819 69 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
Pumo8g01819 69 Gene3D - 2 63 - -
Pumo8g01819 69 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 67 IPR044636 GO:0003700
Pumo8g01819 69 Coils Coil 39 59 - -
Pumo8g01819 69 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
Pumo8g01819 69 SMART sant 1 52 IPR001005 -
Pumo8g01819 69 FunFam Transcription factor SRM1 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01819 Pumo-Chr8 54420476 54422966 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01819 - - pvu:PHAVU_003G254400g 125.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02121 4 30272803 30279360 Pumo8g01819 8 54420476 54422966 ECH
Pumo8g01819 8 54420476 54422966 Pumo8g01819 8 54420476 54422966 ECH
Pumo10g00705 10 9056114 9057364 Pumo8g01819 8 54420476 54422966 ECH
Pumo8g01819 8 54420476 54422966 Pumo4g02121 4 30272803 30279360 ECH