Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01806 ATGGATCAGTCACCACCTTATTATAACCGATTTCCTCAGACTCCAAACTCAACCAAGAAGGGAAGAAGTGGTTATGAGCCATCAGACACAGAGACAGAATGGCAAGAGATTCCACGGCATGAACGAGAAAGAAGAAAATTCAATTTAGAAGAAGCAAAAGCACTTACTCTAAAGAACAAAAGCCCCTTGGCACTACACAGGAGGCACCCTTCAAGGTTTGAAAACGAGGTCTCATCAGCTTCAACAGCTTCAGTTCCACGAAGAAGACACCATAGTAAATCACCCTATAAGCTGCACGTAGCAGAAGAAGATGTTGCTGCATCATTATCACCCATAACAGGTTTGAATACAAGGAGAAATATCAGTCCTTTGCCGAGACCTGACATTGGAAGAACCGTGTCTCCTTTCAGGGAGCAAAGAACTGAGAAGCCAAACTACAAAAGATCAGTGACTGCTCCGAGATTGAGGATTCAAGAGAGTAACCATGTAGGGAAAACCAATGACATGGTTCAGAAACAAAGAGAAGCTTCTCCTTTCAAAGCGTCTTCGGTTGGAGAAATCAACGAGATGATAGCACAGGTGAAGCTATCTAAAGATCCCACTAGCGATTATTCATCAGTGCTTGAAAGCACTGATTCCATTCATCCGGGTGACCTTTTTTTCTCTCGTGAATGCAATGCCTTGCAAGTGAGGAATTCTTCGTTGCCAAGACGCATCCAACAGCATGAGTATTTCAGTCCAAGGCCGCCGGCGAACACCACGAGAATCATCCCATCTGAAAGCAAAGGAAATGGTGACCTTAACATGAATATGAATACCTTGTCTCGGTTAAGTTCTGCTGCTACGAGTAGAAAGGGTAGTGGCACAGGGAAGCCAAGTAGTGTAACAAGCGAAGGTAGTGGAAAGACAACTGCAAGCATGAGGAAATTCACTGCCAACAGAAAAAAGAACCAGAAAGATACATGGTTTGCTTGCATGAGAACCGGTAACTGCAGAACCACGAGAAAATCGCCTGAACGTCGACCAATTGATGAATCTTCTTTCATAGAGAGGGCAGTGGTAGTGGAAAGCCTCCCACAATTCTGGGCAGATAAACATCAACCTGCTTCACTTAATGGCTTCATTTGCAACAAACAAGAAGCTCAACTTCTCAAGGAATTGGTGTCTCAGGGCTCTTGTCCTCATGTTTTGCTTCAAGGACCCTCTGGCTCCGGGAAAAGAGAACTAGCAATGGCTCTTCTTCGAGAAATATATGGGGATGCATGTTGTAACCTGTCTCATGATTTAAGACATTTCCCTATTCAGGACCAAAGGCTTAAGAAAGTATCTGTTCCAATAACATCCAGTTCTCATCACATGGAGCTCAATGTAAATTCAGAACCTAATGCTAAATATGCTTTAATGGGATTAATCAAAGAAATTAACAATATATATGCAATTGCCCCCGAAGTCAGCAACATTAATTTCAAGTCAGATTATAAAGTAATAGTTCTTTATGACATCCACAAAGCAGTAGATAACATCCAACACATTATCAAATGGATCATAGACCGCTATTCTGATATTTGCAAATTAGTACTCTGCTGTGAAGATGATGCAGACATTATTGAACCTATGAAAAACCGGTTCAAAGTTATCCAAGTTGATGCTCCTCAAAATCACGAAATTATTGAGGTTCTTATTCAGATAGCAAAGAATGAGGAAATTGATCTATCCATGAATTTTGCTGCAAAAATTGCTACAAAATCTAAGCAGAACCTCAGAAAAGCAATCATGGCTCTTGAAGCATGCAAAGCACACAACTATCCATTTTCAGAAGAACAACCAATTCCGGTTGGATGGGAGGAGATTGTAATAGAAGTTGCCGCAGAGATCCTAGCCGATCCATCATTTTCACGGCAAGAAACTTCTCTTTCTATCTTATGGAAATTTCAAATGCTTCTCTTGGATTTTGTCCACTCGAAATTGATTCTCCAGAAACTCGTGGAACATCTCCTAAAAAGAATTGAGGCCAGCTTAAAAAGGGAGCTTTACTATTGGCATGCTTATTATGACAGAAGACTCCCACCAGGAATAACTGCTTTACTAAAGTTAGAAGAATTCGTGGCCAAGTTCATGAGCATGTGCAGAAAAAACTCTGGCACTGGCAGTCGGCAATATGTGTAG 2166 0.4141 MDQSPPYYNRFPQTPNSTKKGRSGYEPSDTETEWQEIPRHERERRKFNLEEAKALTLKNKSPLALHRRHPSRFENEVSSASTASVPRRRHHSKSPYKLHVAEEDVAASLSPITGLNTRRNISPLPRPDIGRTVSPFREQRTEKPNYKRSVTAPRLRIQESNHVGKTNDMVQKQREASPFKASSVGEINEMIAQVKLSKDPTSDYSSVLESTDSIHPGDLFFSRECNALQVRNSSLPRRIQQHEYFSPRPPANTTRIIPSESKGNGDLNMNMNTLSRLSSAATSRKGSGTGKPSSVTSEGSGKTTASMRKFTANRKKNQKDTWFACMRTGNCRTTRKSPERRPIDESSFIERAVVVESLPQFWADKHQPASLNGFICNKQEAQLLKELVSQGSCPHVLLQGPSGSGKRELAMALLREIYGDACCNLSHDLRHFPIQDQRLKKVSVPITSSSHHMELNVNSEPNAKYALMGLIKEINNIYAIAPEVSNINFKSDYKVIVLYDIHKAVDNIQHIIKWIIDRYSDICKLVLCCEDDADIIEPMKNRFKVIQVDAPQNHEIIEVLIQIAKNEEIDLSMNFAAKIATKSKQNLRKAIMALEACKAHNYPFSEEQPIPVGWEEIVIEVAAEILADPSFSRQETSLSILWKFQMLLLDFVHSKLILQKLVEHLLKRIEASLKRELYYWHAYYDRRLPPGITALLKLEEFVAKFMSMCRKNSGTGSRQYV 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01806 721 Gene3D - 360 551 IPR027417 -
Pumo8g01806 721 Gene3D - 613 709 - -
Pumo8g01806 721 MobiDBLite consensus disorder prediction 24 53 - -
Pumo8g01806 721 MobiDBLite consensus disorder prediction 1 95 - -
Pumo8g01806 721 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 359 698 - -
Pumo8g01806 721 MobiDBLite consensus disorder prediction 245 306 - -
Pumo8g01806 721 FunFam replication factor C subunit 3 552 610 - -
Pumo8g01806 721 SUPERFAMILY post-AAA+ oligomerization domain-like 613 708 IPR008921 GO:0003677|GO:0006260
Pumo8g01806 721 Gene3D - 552 610 - -
Pumo8g01806 721 MobiDBLite consensus disorder prediction 1 23 - -
Pumo8g01806 721 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 360 599 IPR027417 -
Pumo8g01806 721 FunFam Replication factor C subunit 3 360 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01806 Pumo-Chr8 54244770 54248493 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01806 361 708 Core DNA Replication Machinery Family AT5G27740 36.752 1.26e-70 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01806 K10756 - gmx:100795321 1285.01