Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01778 ATGATGCCTCAACGAGCTAATCTGCACATAGCCTTAACATTTTTACAATTTTGTTATGCAGGAAATCATATATTTGTGAGAATTGCACTTGATACAGGCGTAAGCAAGCTTATCTTTCCTGTCTATAGAAATATCACCGCCTTGCTTCTTCTGGGTCCCCTCGCATATTTTTCAGAGAAGAAAGACAGGCCATCAATAACCAGTTATTGTGTACTACACTTTTTCCTACTTGGACTTGTTGGAATAACAATGAAAGAAGGATTCTACCTCTTGGGTTTGGAGAAAACATCACCTACCTTTGCTGCAGCTATGCAGAATTCTGTTCCAGCCCTCACCTTTCTGATGGCTGCGCTACTCAGATATGAGAGCGTGCACTTCAATAGGATTGATGGTCTGGCTAAGGTCCTTGGTGTCCTTGCTTCTGTTGGAGGAGCTTCAATCATTACCCTTTACAAGGGACCTGTTATTTATACTCCACATTTAGCATTACATCAGAAACAATACTTGTCTACATTGGGGGATGCCACAGGAAAGAACTGGAACTTGGGTGGCATCTATCTCTTTGGTCACTCCTTATGTTGGTCTGGTTGGATTGTGATGCAAGCATCTGTTCTGAAAAAATACTCAGCCCCACTCACAGTTTCTGCATTTACATGTTTCTTTGGTGTTGTGCAGTTTCTGACAATTGCAGCCTTTTTTGAGAAGGATTCCAAAGCCTGGCAGTTCAATTCTAGTGGAGAGATCTACAGTGTTTTGTTCTCGGGACTGGTGACTTCAGGGCTGGCATCAGCAATACAGATATGGACTATTGGCAAAGGAGGGCCAGTGCTTGCTTCAATTTATCTACCTTTACAAACATTACTTGTAGCTGTGATGGCATCTTTTGTATTCGGTGAAGGATTCTTCTTGGGAGGGATTATTGGAGCATTCTTAATTATATCCGGCTTGTACCTTGTTGTCTGGGGAAGAAGTCAAGAAACTAAGTCTGCCAAAGAGGTCATAGTCCCCATTGAGCCCAAGAATCATTGGGAAGAAAAAAGTGACAGTTCTTCCCTCACCCAACCATTGATCACTTCTAATTCCTTTTAA 1089 0.4206 MMPQRANLHIALTFLQFCYAGNHIFVRIALDTGVSKLIFPVYRNITALLLLGPLAYFSEKKDRPSITSYCVLHFFLLGLVGITMKEGFYLLGLEKTSPTFAAAMQNSVPALTFLMAALLRYESVHFNRIDGLAKVLGVLASVGGASIITLYKGPVIYTPHLALHQKQYLSTLGDATGKNWNLGGIYLFGHSLCWSGWIVMQASVLKKYSAPLTVSAFTCFFGVVQFLTIAAFFEKDSKAWQFNSSGEIYSVLFSGLVTSGLASAIQIWTIGKGGPVLASIYLPLQTLLVAVMASFVFGEGFFLGGIIGAFLIISGLYLVVWGRSQETKSAKEVIVPIEPKNHWEEKSDSSSLTQPLITSNSF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01778 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 137 - -
Pumo8g01778 362 PANTHER WAT1-RELATED PROTEIN 10 331 IPR030184 GO:0016020|GO:0022857
Pumo8g01778 362 Pfam EamA-like transporter family 183 320 IPR000620 GO:0016020
Pumo8g01778 362 Pfam EamA-like transporter family 16 144 IPR000620 GO:0016020
Pumo8g01778 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01778 Pumo-Chr8 53874177 53876750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01778 2 361 Nodulin-like Gene Family AT1G75500 56.032 2.01e-145 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01778 - - gmx:100790386 654.825