Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01751 ATGAATCTTTCTGGGGAGTTACCGCTTGAACTCTCGGGGTTGCCCAGTTTGCAGGTTGTTGCACTTCAGGAGAACAAGTTATCTGGTGATGTGCCTGAAGGGTTTAGCAGTTTGATGAGTTTGCAGTACGTGAATCTCAGTTCTAATGCCTTTTCTGGGCATATTCCTGAGAACTATGGCTTTCTTCGTTCCTTGCTTGTTCTTTCATTGTCTGATAATCACGTTACAGGAACAATCCCTTCGGAAATTGGAAATTGCTCTGGTATTGAAATTCTTGAGCTTGGATCAAATTCTTTGACAGGTGTCATTCCTGCTGATCTCTCTCGCCTCACCCTTTTGAAAGTGCTTGATTTGAGTGGGAATAATTTAACTGGGGATGTGCCTGAGGAAATCTCCAAATGCTCGTCATTAACCACTTTGTTTGTGGATCACAACCATCTTTCAGGGGCCATACCTGGGCCGTTGGGGGATCTATCAAACCTAACAATGCTGGATCTCTCTGCTAACAACTTGAGTGGGGTAATACCAAGTAATCTTTCTATGATCACAGGTTTGGTGTACTTCAATGTCTCAGGAAATAACCTGGGAGGTGAGATACCACCAACGTTGGGATCTCGGTTCAGCAACCCCTCTGTATTCGCAAATAATCAAGGTTTATGTGGGAAGCCATTGGAAAAATGCGAAGATATACACGGTAGGGACAAAAAGAGGTTGATTGTGCTGGTGATTGTCATTGCTTGTGGAGCTTTTGCACTAGTGTTATTTTGCTGCTTCTACGTTTTCAGTCTATTGAGATGGCGTAAAAGACTGAAACAAGGAGTATCGGGTGAAAAGAAAAAGAGTCCCGCTAGAGCCAGTTCTGGAACAAGTGGAGCTCGTAGCAGCAGCACTGAGAGTGGGGGACCAAAACTAGTGATGTTCAACACCAAAATCACACTTGCTGAGACCATTGAAGCAACAAGACAATTCGACGAAGAGAACGTGCTGAGCAGAACAAGGCATGGATTAGTGTTCAAGGCCTGCTACAACGATGGAATGGTCCTTTCCATTCGCAGGCTCCAAGATGGATCATTGGATGAGAACATGTTTAGAAAAGAAGCCGAATCACTAGGCAAAGTCAAGCACCGAAATTTAACAGTTCTCAGAGGTTACTATGCTGGGCCACCTGACATGAGACTCCTAGTCTACGACTACATGCCCAATGGAAACCTTGCAACCCTCCTCCAAGAAGCTTCTCACCAAGATGGCCACGTTCTAAATTGGCCAATGCGACACCTCATTGCTCTAGGGATTGCCCGTGGCCTAGCCTTCCTACACCAATCCTCAATGGTCCATGGTGACGTGAAACCACAAAACGTCCTATTCGATGCAGATTTCGAAGCCCACTTATCAGATTTTGGGTTAGACAAGTTAACAGTAGCCACACCAGGCGAAGCCTCCACTTCAACATCCATTGGCACGTTGGGTTACGTTTCTCCAGAAGCAGTCTTGACCGGGGAAGCCACAAAGGAGAGTGATGTTTACAGCTTTGGCATTGTGTTGCTGGAACTACTGACAGGAAAACGACCTGTGATGTTCACCCAGGACGAAGACATTGTGAAGTGGGTAAAAAAACAACTTCAGAGGGGTCAAATAACAGAGCTATTAGAACCGGGTCTACTTGAGTTGGACCCAGAATCATCAGAGTGGGAAGAGTTTTTACTGGGTGTAAAAGTTGGGTTGCTTTGCACAGCACCTGACCCTGTTGATCGACCAACCATGTCCGACATCGTTTTCATGCTTGAAGGCTGCAGAGTCGGTCCTGATATCCCATCCTCCGCAGATCCCACCTCTCAACCTTCTCCGGCATAA 1851 0.4603 MNLSGELPLELSGLPSLQVVALQENKLSGDVPEGFSSLMSLQYVNLSSNAFSGHIPENYGFLRSLLVLSLSDNHVTGTIPSEIGNCSGIEILELGSNSLTGVIPADLSRLTLLKVLDLSGNNLTGDVPEEISKCSSLTTLFVDHNHLSGAIPGPLGDLSNLTMLDLSANNLSGVIPSNLSMITGLVYFNVSGNNLGGEIPPTLGSRFSNPSVFANNQGLCGKPLEKCEDIHGRDKKRLIVLVIVIACGAFALVLFCCFYVFSLLRWRKRLKQGVSGEKKKSPARASSGTSGARSSSTESGGPKLVMFNTKITLAETIEATRQFDEENVLSRTRHGLVFKACYNDGMVLSIRRLQDGSLDENMFRKEAESLGKVKHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSSMVHGDVKPQNVLFDADFEAHLSDFGLDKLTVATPGEASTSTSIGTLGYVSPEAVLTGEATKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPVDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPA 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01751 616 Gene3D Ribonuclease Inhibitor 1 231 IPR032675 -
Pumo8g01751 616 PRINTS Leucine-rich repeat signature 158 171 - -
Pumo8g01751 616 PRINTS Leucine-rich repeat signature 113 126 - -
Pumo8g01751 616 Gene3D Transferase(Phosphotransferase) domain 1 399 602 - -
Pumo8g01751 616 SMART LRR_typ_2 62 86 IPR003591 -
Pumo8g01751 616 SMART LRR_typ_2 14 37 IPR003591 -
Pumo8g01751 616 SMART LRR_typ_2 110 134 IPR003591 -
Pumo8g01751 616 SMART LRR_typ_2 158 182 IPR003591 -
Pumo8g01751 616 SUPERFAMILY L domain-like 2 221 - -
Pumo8g01751 616 MobiDBLite consensus disorder prediction 275 303 - -
Pumo8g01751 616 Pfam Leucine rich repeat 64 123 IPR001611 GO:0005515
Pumo8g01751 616 Pfam Leucine rich repeat 136 195 IPR001611 GO:0005515
Pumo8g01751 616 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 399 602 - -
Pumo8g01751 616 ProSiteProfiles Protein kinase domain profile. 323 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01751 616 SUPERFAMILY Protein kinase-like (PK-like) 303 604 IPR011009 -
Pumo8g01751 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Pumo8g01751 616 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 597 - -
Pumo8g01751 616 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 110 227 - -
Pumo8g01751 616 Pfam Protein kinase domain 335 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01751 616 MobiDBLite consensus disorder prediction 282 303 - -
Pumo8g01751 616 Gene3D Phosphorylase Kinase; domain 1 288 398 - -
Pumo8g01751 616 FunFam Putative LRR receptor-like serine/threonine-protein kinase 285 398 - -
Pumo8g01751 616 SMART serkin_6 323 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01751 616 FunFam LRR receptor-like serine/threonine-protein kinase 36 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01751 Pumo-Chr8 53625184 53627034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01751 2 616 Receptor kinase-like Gene Family AT4G36180 74.760 0.0 900
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Pumo8g01751 Pkinase 6.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01751 - - gmx:100305362 1147.5