Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01739 ATGGCCATCAAAATATCCAATAAACTACCACAAGCTGTTGTTCTCAAGCAAATTGTCAAAAGATGCTCAAGTTTTGGCAAGAAGCAGACCTACAATGAAGAGGGTCTTCCTGATGATGTGCCAAAAGGCCATTTTGCGGTCTATGTTGGGGAGAACAGGTCCAGATATATTATCCCAATCTCATGGCTGGCTCACCCCCAGTTTCAAAGTCTGCTCCAAAGAGCTGAGGAGGAGTTTGGCTTCAACCATGAAATGGGACTTACCATACCCTGTGATGAAGTTGCTTTTGAGTCCTTAACTTCCACTGATGAGATGAGAAAGAGGGACTATACTACACATTTGAGAAGCTGA 351 0.4359 MAIKISNKLPQAVVLKQIVKRCSSFGKKQTYNEEGLPDDVPKGHFAVYVGENRSRYIIPISWLAHPQFQSLLQRAEEEFGFNHEMGLTIPCDEVAFESLTSTDEMRKRDYTTHLRS 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01739 116 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 35 101 IPR003676 GO:0009733
Pumo8g01739 116 Pfam Auxin responsive protein 27 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01739 Pumo-Chr8 53487989 53488592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01739 19 112 Calmodulin-binding Proteins AT3G43120 43.617 5.79e-21 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01739 K14488 - gmx:100798840 200.675