Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01737 ATGATGGAACCTGAACAAGCACAAGGGAGCCAACAAAACGAGGATGGTGGCAGTGGAAAAGGGGGGTTTCTGAGCAGGCAAAGTAGTACACGGTGGACTCCCACAACCGACCAGATAAGAATATTGAAGGACCTTTACTACAACAATGGAATTAGATCCCCGAGTGCAGAGCAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGTAAGATTGAAGGCAAGAATGTCTTTTATTGGTTCCAGAACCACAAAGCTCGAGAAAGGCAGAAGAAAAGGTTCACTTCTGATAATCTCCCCATGCAAAGACCCCCAACCAATCCTTCTTCTGCTTCTGCTTGGAAACATGATCAAGATCCCATTCACACCAAGTATTCTAACATCTCTTCTACTGGGATCTCTTCGGCATCATCTTCTTCTGTTGAGATGGTTACTGTGGGGCAGATGGGGAATTATGGGTATGGTTCTGTGCCCATGGAGAAAAGTTTTAGGGACTGCTCAATATCTGCTGGGGGTAGCAGTGGCCATGTTGGAATAAACCAACACTTAGGATGGGTTGGTGTGGACCCATATTCCTCAGCCTACACCAACTTCTTCGACAAAATAAGGCCAACTGAGGAAACCCTTGAAGAAGAACAAGAAGAGGATGGTGCTGCTGAGATTGAAACCCTCCCTTTATTCCCTATGCACGGTGAGGACATCCATGGCTATTGCAATCTCAAGTCTAATTCTTATAACTATGATGGAAACGGCTGGTATCATACTGAACATGGGTTCAAGCATGCTTCTCGTGCTTCCTTGGAGCTCAGTCTCAACTCCTACACTCGCAGGTCTCCAGATTATGCTTAA 849 0.4617 MMEPEQAQGSQQNEDGGSGKGGFLSRQSSTRWTPTTDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDNLPMQRPPTNPSSASAWKHDQDPIHTKYSNISSTGISSASSSSVEMVTVGQMGNYGYGSVPMEKSFRDCSISAGGSSGHVGINQHLGWVGVDPYSSAYTNFFDKIRPTEETLEEEQEEDGAAEIETLPLFPMHGEDIHGYCNLKSNSYNYDGNGWYHTEHGFKHASRASLELSLNSYTRRSPDYA 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01737 282 CDD homeodomain 30 92 IPR001356 GO:0003677
Pumo8g01737 282 Pfam Homeodomain 29 90 IPR001356 GO:0003677
Pumo8g01737 282 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 10 276 IPR044555 GO:0003700|GO:0099402
Pumo8g01737 282 Gene3D - 24 90 - -
Pumo8g01737 282 SMART HOX_1 27 95 IPR001356 GO:0003677
Pumo8g01737 282 MobiDBLite consensus disorder prediction 97 116 - -
Pumo8g01737 282 SUPERFAMILY Homeodomain-like 23 97 IPR009057 -
Pumo8g01737 282 ProSiteProfiles 'Homeobox' domain profile. 25 91 IPR001356 GO:0003677
Pumo8g01737 282 MobiDBLite consensus disorder prediction 89 116 - -
Pumo8g01737 282 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01737 Pumo-Chr8 53455760 53457326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01737 23 233 Wox Gene Family AT2G17950 45.161 7.59e-56 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pumo8g01737 Homeodomain 1.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01737 - - vra:106776674 487.263