Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01730 ATGGGCATCTGTTTCTCCGCCACCAAGGTCAGCGGCTCCAGCAGCAACCGCAAAGGCTCGGCCGCGCCGGCGGCGCCTCCGGTGCCGGCACAGAAGCAGCAACCGTCGTCGCAGGGTCAACGGCGGCGAGTGCCGGAGGAGTCGCAGAAAAACCCACGCGCCAAGGACAAAGCCGGTGCGCGTCGGCAAGGGACGCATGTTCCCTGCGGAAAGCGAACGGATTTCGGGTACGAGAAAGACTTCGACAAGAGATTCTCGCTCGGGAAATTGTTGGGGCACGGACAATTCGGTTACACCTACGTTGGAGTAGACAAAGCAAATGGGGATCGTGTCGCCGTTAAGAGACTCGAGAAGGGCAAGATGGTTCTCCCCATAGCGGTTGAGGATGTTAAGCGAGAAGTCAAGATATTGAAAGAACTTACAGGCCATGAAAATGTGGTTCAGTTCTATAATGCTTTTGAGGATGATTCATATGTGTACATAGTTATGGAGTTATGTGAGGGTGGAGAGCTGCTAGATCGGATATTGGCCAAGAAGGACAGTCGTTATACTGAAAAAGATGCAGCTGTGGTTGTAAGGCAGATGCTTAAGGTTGCGGCTGAGTGTCATTTACATGGGTTGGTACATCGGGACATGAAACCAGAGAATTTTCTTTTCAAGTCAACCAAAGAAGATTCACCTTTAAAGGCTACCGATTTTGGTTTGTCTGATTTCATAAAACCTGGAAAGAGGTTTCAAGATATTGTTGGCAGTGCTTACTATGTTGCACCAGAAGTGTTAAAACGAAAGTCAGGTCCCGAGTCAGATGTATGGAGTATTGGTGTGATTACATACATATTGCTTTGTGGGAGACGCCCATTTTGGGATAAGACGGAGGATGGTATCTTCAAGGAGGTCTTACGGAACAAGCCTGATTTCCGGCGGAAACCATGGCCAACCATAAGCAATGCTGCAAAAGATTTTGTGAAGAAATTGTTGGTAAAAGATCCTCGCGCAAGATATACTGCTGCTCAGGCTCTATCACATCCATGGGTTAGAGAAGGAGGAGAGGCATTAGAGATTCCTATTGATATATCTGTCCTGAGCAACATGCGACGGTTTGTGAAATATAGTCGGTTGAAACAATTTGCACTAAGGGCATTGGCTAGCACACTTAACGAAGGAGAATTGTCTGATCTAAAAGATCAGTTTGATGCAATAGATGTGGACAAAAATGGTTCTATTAGTCTTGAAGAGATGAGACAGGTAACCCATTAA 1257 0.471 MGICFSATKVSGSSSNRKGSAAPAAPPVPAQKQQPSSQGQRRRVPEESQKNPRAKDKAGARRQGTHVPCGKRTDFGYEKDFDKRFSLGKLLGHGQFGYTYVGVDKANGDRVAVKRLEKGKMVLPIAVEDVKREVKILKELTGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKEDSPLKATDFGLSDFIKPGKRFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNAAKDFVKKLLVKDPRARYTAAQALSHPWVREGGEALEIPIDISVLSNMRRFVKYSRLKQFALRALASTLNEGELSDLKDQFDAIDVDKNGSISLEEMRQVTH 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01730 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Pumo8g01730 418 Gene3D - 371 385 - -
Pumo8g01730 418 MobiDBLite consensus disorder prediction 43 62 - -
Pumo8g01730 418 SUPERFAMILY Protein kinase-like (PK-like) 82 360 IPR011009 -
Pumo8g01730 418 MobiDBLite consensus disorder prediction 1 71 - -
Pumo8g01730 418 FunFam calcium-dependent protein kinase 28-like 171 364 - -
Pumo8g01730 418 SUPERFAMILY EF-hand 371 416 IPR011992 -
Pumo8g01730 418 ProSiteProfiles EF-hand calcium-binding domain profile. 388 418 IPR002048 GO:0005509
Pumo8g01730 418 ProSiteProfiles Protein kinase domain profile. 85 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01730 418 Pfam Protein kinase domain 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01730 418 ProSitePatterns EF-hand calcium-binding domain. 401 413 IPR018247 -
Pumo8g01730 418 PANTHER SERINE/THREONINE-PROTEIN KINASE 63 413 - -
Pumo8g01730 418 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
Pumo8g01730 418 SMART serkin_6 85 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01730 418 Gene3D Transferase(Phosphotransferase) domain 1 171 362 - -
Pumo8g01730 418 Gene3D - 363 416 - -
Pumo8g01730 418 FunFam CDPK-related kinase 1 78 170 - -
Pumo8g01730 418 CDD STKc_CAMK 84 344 - -
Pumo8g01730 418 Gene3D Phosphorylase Kinase; domain 1 78 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01730 Pumo-Chr8 53356091 53361864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01730 1 415 EF-hand Containing Proteins AT5G66210 75.962 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo8g01730 Pkinase 1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01730 K13412 - gmx:100817249 766.148