Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01729 ATGATTTCCTCGGTTTCTTTTCCAGCGTCTCTCCCCGCCGTTAACTTCTCCGGCAACGCCGTGGCTTCGCCGTCTTGTCGCGTCAAATCCCGGCCAGTAGTCGCCTTCGCCACCGCCACAGCCACCGCCGAAGCTCGCTCTTCCTGGACGGAGCAACCGAGACCTTCGTATCTGAACTCCTCTTGCTCTTCGCTCTACGATATCCTCGGCATCCCCGCCGGAGCCTCTAACCAAGAAATCAAGGCCGCGTACCGGCGACTGGCCAGAGTCTGCCACCCCGACGTGGCGGCGATCGACCGGAAAAACTCCTCGGCGGACGAGTTCATGAAGATCCACGCCGCGTACTCTACTCTCTCGGATCCCGACAAGCGCGCCAGCTACGACCGGAGCCTCTTCCGGCGACAACGGCCGTTGTCGACGGCGGCGGTATTTTCCGGCTACACGCGTCGGAACTGGGAAACGGATCAGTGCTGGTAG 477 0.6164 MISSVSFPASLPAVNFSGNAVASPSCRVKSRPVVAFATATATAEARSSWTEQPRPSYLNSSCSSLYDILGIPAGASNQEIKAAYRRLARVCHPDVAAIDRKNSSADEFMKIHAAYSTLSDPDKRASYDRSLFRRQRPLSTAAVFSGYTRRNWETDQCW 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01729 158 Gene3D DnaJ domain 55 150 IPR036869 -
Pumo8g01729 158 ProSiteProfiles dnaJ domain profile. 64 131 IPR001623 -
Pumo8g01729 158 CDD DnaJ 66 120 IPR001623 -
Pumo8g01729 158 SUPERFAMILY Chaperone J-domain 61 134 IPR036869 -
Pumo8g01729 158 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 17 138 - -
Pumo8g01729 158 SMART dnaj_3 63 123 IPR001623 -
Pumo8g01729 158 Pfam DnaJ domain 65 128 IPR001623 -
Pumo8g01729 158 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Pumo8g01729 158 PRINTS DnaJ domain signature 66 84 IPR001623 -
Pumo8g01729 158 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pumo8g01729 158 PRINTS DnaJ domain signature 84 99 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01729 Pumo-Chr8 53320267 53321420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01729 66 128 C2H2 Transcription Factor Family AT1G74250 41.791 4.32e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01729 - - gmx:100800959 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01729 8 53320267 53321420 Pumo8g01729 8 53320267 53321420 ECH