Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01716 ATGGAAGAACAAAATTTGAGGAAAGAAGAATCTTCCAGCCCCAGCTCCAATTATGCCACTGAAGACAACCAACCTAAATCACTGTCCACCAAAGAATCATCATCCATTTCAACAGAAGATCAGGATGAAGATTCTGAATGTGGGGAAACACATAGGGTCACCAGCTCAAGTAAAGCAGTAGATGGAAAGAAATCTCTCGAGGGCCTAAAGATTTTGCTTGCAGAAGATACACCAGTACTTCAAAGGGTTGCAACCATAATGCTTGAAAAGATGGGAGCAGATGTTGTTGCTGTAGGTGATGGACAACAGGCAGTAGATGCTCTCAATTGCATGTTCACAGCTGAAGATTGTAGAAGGGAATCACTTCAGAAAGAAAGAAACACAAGATCTCAAACAGAGATTTTGACTTGCCGTCCTTATGACTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGCTACGAGGCAACAAAAGCAATCAGGAAATCAGAAGTGGGAACAGGCTAG 510 0.4235 MEEQNLRKEESSSPSSNYATEDNQPKSLSTKESSSISTEDQDEDSECGETHRVTSSSKAVDGKKSLEGLKILLAEDTPVLQRVATIMLEKMGADVVAVGDGQQAVDALNCMFTAEDCRRESLQKERNTRSQTEILTCRPYDLILMDCQMPKMDGYEATKAIRKSEVGTG 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01716 169 Gene3D - 47 168 - -
Pumo8g01716 169 SUPERFAMILY CheY-like 67 163 IPR011006 -
Pumo8g01716 169 MobiDBLite consensus disorder prediction 10 35 - -
Pumo8g01716 169 Pfam Response regulator receiver domain 71 165 IPR001789 GO:0000160
Pumo8g01716 169 MobiDBLite consensus disorder prediction 1 60 - -
Pumo8g01716 169 ProSiteProfiles Response regulatory domain profile. 70 169 IPR001789 GO:0000160
Pumo8g01716 169 CDD REC_hyHK_CKI1_RcsC-like 71 167 - -
Pumo8g01716 169 PANTHER TWO-COMPONENT HISTIDINE KINASE 12 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01716 Pumo-Chr8 53112729 53113650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01716 56 168 Histidine Kinase Gene Family AT2G17820 63.636 3.03e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo8g01716 Response_reg 3.4e-10 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01716 - - gmx:100807543 306.99