Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01698 ATGATTTATGTGCATGCTAAGGGGGTGATCATTGTCATTGATGATGAGTATGTTATAGTGATATGCAAATATCAACCAAAGATCTATGGTCAGATTTATAATTACAGAATGTCACTATGGAGAGAGCATCTTGGCATGTTAGATGAAACTTTTGAGGAAGCAGAGAAATTGAAGTATGTGTGTAAAATGAATGCATTTGCAGACAATAACTGGAGAATATTCGCCTCTGAAGATCTCTCACTTCTGCAGGAAGAAATTCAGGATGAATCTGCTGAACGTGATGTTTTCTTAAAGAAAATAGAAAGCATATTATCATGCCGAATGAAATGGCCTTACGAGGTATATATCTCACACATCAACAAAGTTTTCTATAAAAAATACTATGGTTCAGAAGTCTGTGATGAGAATGAAGGTCTTAAAGCCTCAGGAGGAATGGACATCGTATATTGGATATTAAGTTATTATTCCCTATTATGTAATTCATTATCAAATATTGGGGATGGATTATCCATCCCCCAAGAAGTAAAAGAAAGTGGCAATGTTAATCATTTCCCCTTGTGA 561 0.3494 MIYVHAKGVIIVIDDEYVIVICKYQPKIYGQIYNYRMSLWREHLGMLDETFEEAEKLKYVCKMNAFADNNWRIFASEDLSLLQEEIQDESAERDVFLKKIESILSCRMKWPYEVYISHINKVFYKKYYGSEVCDENEGLKASGGMDIVYWILSYYSLLCNSLSNIGDGLSIPQEVKESGNVNHFPL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01698 186 PANTHER PHOSPHOLIPASE D 19 92 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01698 Pumo-Chr8 52997820 52999006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01698 1 94 Phospholipase D Gene Family (Wang group) AT4G00240 36.885 3.91e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01698 K01115 - gmx:100801787 104.375