Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01687 ATGGCTGGAGTTGACGAGGAGTATCTCAAGGAAATAGAGATGGCTCGAAGTGAACTTGGCACTCTCATCACCAACAATAAATGCGCCCCTCTCATGCTTCAATTAGCACTACATAAACATCTGAAACGATGGAACGATGCTGCTACCTACGATGCCAGAAGCAAGAAAGGAGGCCCCAACGGTTCTATCAGATTGAGGATTGGACACGAAGCAAACAAGGCATTGGAATACTGTGAAATAGTGAAGATCAAACTTAAGCTTAAAAAAGTTTCATACGCGGACCTTTACCAGCTTGCTGGTGTTGTTGCAGTAGAGGTCACTGAGGGTCCAACTATTCACTTTGTTCCCGGCAGAAAGGATTCAAATGAGTCTCCACGAACTGAAGGGCTCTTTCTAAATGGCGAAGACGATGCAAGGAATTTAAGGAATATCTTTTCTCGTATGGGTATAAGTGACGAGCAAGACATTGTGGCTCTATGTGGAGGTCACACTTTGATAAGAACAATGTATCCAAAAGTCCCCATGGGTGAGACACCTAAGGGTGAGACACATAAAGATCGCTCTAAGTTTGAAGAAGGAAAATGGACAAAGGAACCTTTGAAGTTTGATAACTCGTATTTTAAGGAACTATTGAGTAAGGATGCATCCTTTTCGAGGCTTCCCATGGACTATGCTTTAGTAGAGGATCCAAAATTCCATCATCTATGTTGA 711 0.4276 MAGVDEEYLKEIEMARSELGTLITNNKCAPLMLQLALHKHLKRWNDAATYDARSKKGGPNGSIRLRIGHEANKALEYCEIVKIKLKLKKVSYADLYQLAGVVAVEVTEGPTIHFVPGRKDSNESPRTEGLFLNGEDDARNLRNIFSRMGISDEQDIVALCGGHTLIRTMYPKVPMGETPKGETHKDRSKFEEGKWTKEPLKFDNSYFKELLSKDASFSRLPMDYALVEDPKFHHLC 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01687 236 Pfam Peroxidase 22 235 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g01687 236 Gene3D - 16 131 - -
Pumo8g01687 236 MobiDBLite consensus disorder prediction 172 191 - -
Pumo8g01687 236 ProSiteProfiles Plant heme peroxidase family profile. 29 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g01687 236 Gene3D Peroxidase, domain 2 132 235 - -
Pumo8g01687 236 PRINTS Plant ascorbate peroxidase signature 108 120 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pumo8g01687 236 PRINTS Plant ascorbate peroxidase signature 29 44 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pumo8g01687 236 PRINTS Plant ascorbate peroxidase signature 149 170 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pumo8g01687 236 PRINTS Plant ascorbate peroxidase signature 89 107 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pumo8g01687 236 PRINTS Plant ascorbate peroxidase signature 8 28 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pumo8g01687 236 SUPERFAMILY Heme-dependent peroxidases 44 234 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo8g01687 236 FunFam Peroxidase 1 98 - -
Pumo8g01687 236 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 4 235 IPR044831 GO:0004601|GO:0034599
Pumo8g01687 236 PRINTS Haem peroxidase superfamily signature 29 43 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g01687 236 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g01687 236 PRINTS Haem peroxidase superfamily signature 90 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g01687 236 PRINTS Haem peroxidase superfamily signature 108 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo8g01687 236 PRINTS Haem peroxidase superfamily signature 155 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01687 Pumo-Chr8 52890870 52895511 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01687 88 230 Peroxidase AT4G16270 30.539 7.29e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01687 K00434 - gmx:100813526 230.335