Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01682 ATGGGGATCGTGAAGGTTCCGGCGCGGCGGATTGCCACCGGAGAGAAGATTTCCGAGTGGTTCCCGATTCTCGGGCCGTCCGGCAAGCCGCCGAAGCCGGACACGGCGCTGCGCGTCGAGATGACGTTCACGGCGGTGGCGGACAATCCACTGTACCAGCGAGGCATTGCGGCGGATCCCGAGCACCACGGCGTGAGGCACACTTATTTTCCGGTGAGGAAGGGGAGTTCGGTGAGGCTGTACCAGGATGCGCATTGCACCGAATCTGGTGAGGGGAAGTTACCGGAGATAAAGCTTGAGAATGGAAATGTTTATAGGCACGAGAAGTGTTGGGAGGATATTTGTTATGCTATATCTGAGGCTCATCACATGGTGTATTTGGTGGGTTGGTCGATTTACCATAAGGTGAGGCTTGTGAGAGAGCCTACTAGGCCGTTGCCGCGAGGGGGAGATTTGACACTTGGTGAGTTGCTTAAGTATAAGTCTGAAGAAGGGGTGAGAGTTCTGTTGCTGGTTTGGGATGACAAGACTTCGCACGATAAAGTTTTCTTGAAGACGGCTGGTGTGATGGGGACTCATGACGAGGAAACAAGGAAGTTTTTTAAGCATTCTTCTGTTATGTGTGTTCTGTCGCCTCGGTATGCCAGCAGCAAGATGAGCTTCTTGAAGCAACAGGTTGTTGGAACGGTCTTCACTCACCACCAAAAATGTGTGATTGTGGACACACAGGCTGCTGGTAATAACCGGAAGATAACTGCTTTTATAGGAGGTCTTGATCTGTGTGATGGTCGCTATGACACACCTGAGCATCGTCTGTTTCGTGATCTTGACACTGTATTTAATGGTGATTTCCACAATCCTACATTTCCTGCTGGAACAAGGGTTCCTAGACAACCATGGCATGATTTGCACTGCAGAATAGATGGAGCTGCTGCATATGATGTTCTTATTAATTTTGAGCAGCGATGGAGAAAAGCAACTAAGTGGAAAGAGCTTGCAATCCTTTTCAAAAAATCCTCTCAATGGCATGATGATGCTTTAATAAGAATAGAACGCATCTCATGGATATTAAGTCCTTCCGGTGCTGCTACCTCAAAGGATAAAGTGGATAGTTATACAGTTGTTCCAGAGGATGACCCTATAGTATGGGTTTCTAGAGAAGATGATCCTGAAAACTGGCATGTTCAGATCTTCCGCTCCATTGACTCAGGATCCCTGAAAGGATTTCCCAAACATGTTGATGTTGCTCTGTCCCAGAATCTTATCTGTGCTAAAAATTTGGTTATAGACAAGAGCATTCAAACAGCATACATTCAAGCGATCAGATCTGCTCAACACTTTATTTATATTGAAAACCAATACTTCATTGGATCATCGTATGCATGGCCATCTTATAAAGATGCAGGGGCTGATAATCTCATCCCAATGGAATTGGCACTGAAAATTGCTAGTAAAATCAGAGCTAAGGAGAGATTTGCTGTCTATATTGTTTTACCAATGTGGCCCGAAGGTGATCCTAAAACTGGGGCTATGCAAGAAATCCTCTTTTGGCAGGGCCAGACGATGCAAATGATGTACAATGTTGTTGCTAGAGAATTGAAATCAATGCAACTTACTGATGTGCACCCGCAAGATTACCTCAATTTTTATTGCCTTGGTAATCGGGAACACTTTAATGAAGATAGTTCAAGCACAAATGGTGCACAGGTCTCAACAGCATATAAATATCGCCGTTTTATGATTTATGTGCATGCTAAAGGGATGATCGTTGATGATGAGTATGTTATAATTGGATCTGCTAATATAAACCAAAGATCTATGGCTGGTACTAAAGATACTGAGATAGCTATGGGTGCATATCAACCCCATTACACGTGGTCAGCAAAGAAAAGGCATCCATATGGCCAGATTTATGGTTACAGAATGTCACTTTGGGGAGAGCATCTTGGCATGTTAGATGAAACGTTTGAAGAACCAGAGAGATTGGAGTGTGTGCATAAAGTGAATGAGATTGCAGACAATAATTGGAAATTATTCGCTTCTGAAGATTTCTCACTCTTGCAGGGACATCTTCTTAAGTATCCTGTACAGGTAGATTCCGATGGGAAGATTAGATCCCTACCTGACTGGGAGAATTTCCCCGATGCTGGCGGAAAGATATCGGGGGCTCATTCCACAACAATTCCAGATATCCTAACAACTTAA 2205 0.4454 MGIVKVPARRIATGEKISEWFPILGPSGKPPKPDTALRVEMTFTAVADNPLYQRGIAADPEHHGVRHTYFPVRKGSSVRLYQDAHCTESGEGKLPEIKLENGNVYRHEKCWEDICYAISEAHHMVYLVGWSIYHKVRLVREPTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKVFLKTAGVMGTHDEETRKFFKHSSVMCVLSPRYASSKMSFLKQQVVGTVFTHHQKCVIVDTQAAGNNRKITAFIGGLDLCDGRYDTPEHRLFRDLDTVFNGDFHNPTFPAGTRVPRQPWHDLHCRIDGAAAYDVLINFEQRWRKATKWKELAILFKKSSQWHDDALIRIERISWILSPSGAATSKDKVDSYTVVPEDDPIVWVSREDDPENWHVQIFRSIDSGSLKGFPKHVDVALSQNLICAKNLVIDKSIQTAYIQAIRSAQHFIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKIASKIRAKERFAVYIVLPMWPEGDPKTGAMQEILFWQGQTMQMMYNVVARELKSMQLTDVHPQDYLNFYCLGNREHFNEDSSSTNGAQVSTAYKYRRFMIYVHAKGMIVDDEYVIIGSANINQRSMAGTKDTEIAMGAYQPHYTWSAKKRHPYGQIYGYRMSLWGEHLGMLDETFEEPERLECVHKVNEIADNNWKLFASEDFSLLQGHLLKYPVQVDSDGKIRSLPDWENFPDAGGKISGAHSTTIPDILTT 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01682 734 Pfam Phospholipase D Active site motif 229 264 IPR001736 GO:0003824
Pumo8g01682 734 Pfam Phospholipase D C terminal 653 723 IPR024632 -
Pumo8g01682 734 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 229 264 IPR001736 GO:0003824
Pumo8g01682 734 FunFam Phospholipase D delta 101 345 - -
Pumo8g01682 734 Gene3D Endonuclease Chain A 402 631 - -
Pumo8g01682 734 SUPERFAMILY Phospholipase D/nuclease 430 663 - -
Pumo8g01682 734 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 579 606 IPR001736 GO:0003824
Pumo8g01682 734 SMART pld_4 579 606 IPR001736 GO:0003824
Pumo8g01682 734 SMART pld_4 229 264 IPR001736 GO:0003824
Pumo8g01682 734 PIRSF PLD_plant 1 734 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pumo8g01682 734 PANTHER PHOSPHOLIPASE D 2 723 IPR015679 -
Pumo8g01682 734 SUPERFAMILY Phospholipase D/nuclease 68 339 - -
Pumo8g01682 734 Gene3D Endonuclease Chain A 94 350 - -
Pumo8g01682 734 Pfam PLD-like domain 438 616 IPR025202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01682 Pumo-Chr8 52846146 52854514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01682 1 570 Phospholipase D Gene Family (Wang group) AT4G35790 73.860 0.0 894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01682 K01115 - gmx:100801787 1451.42