Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01677 ATGGTGATCGAGCATGACATTGAGAGCTGCGGGAGCAGAGCGGTGCAATCTTCGCACGCGCATCATCCTCGGCATCACCGGCAGAAGCTCGAGGTGTACAATGAGGTGCTTCGGCGAATTCAGGAATCGGATTGCGAGGAGGCGCACGTTCCCGGTTTCGACGATCAGCTCTGGCTTCACTTCAATCGGCTTCCCGCTAGGTACGCGTTGGATGTGAATGTGGAGAGGGCAGAAGATGTTTTAGCTCATAAGAGATTGCTCAAGTTGGCGGAGGACCCTGCTTCTCGACCTGCATTTCAAGTACGCTTAGTACAGGTATACCCTTTTGGTGGTGCAAATTATGCTGATTCCATAAATTCAGATCCTTCTGAGAAAGAAGATGCACAGAGTTCTCTTAACTATTCTTTAAAGCAGGGAATTCATCCACCACCTACATTTGGTTCATCCTCTAATCTTGAAGCTCTTGCACTTCAAACAACCAAAAATAGCATTGAAGATGGGGGAAGTGCTATGAGTGTAACACCATATTTCCGGCCCATGCACGAGATTACCTTTTCAACAGTTGACAAGCCTAAACTCCTTAGTCAGTTAACTGCAATACTTGGTGAGATGGGACTGAATATTCAAGAAGCTCATGCATTTTCCACCACTGATGGATTTTCTCTGGATGTCTTTGTTGTTGAGGGATGGCCTAATGAGGAAACTGAGGAGCTGAAAGGTGTGTTGGAAAATGAAATTTACAAGGTTAAGGAGCAAAATATGTCAAATCAGGGCATACATTATGCTGCCAATGAACAATCACAGGCAAGGATGGAACACTCCCCTCATTGCATTCAAATACCATCTGATGGAGCTGATGTCTGGGAAATTGATACCAACCAGCTGAAATATGAAAACAAAGTTGGCTCTGGGTCATTTGGTGACTTGTACAGAGGTACATACTGCAGTCAAGATGTGGCTATCAAAGTTCTTAAGCCTGAGCGTATAAGTACAGATATGCTGAGGGAGTTTGCTCAGGAAGTTTATATCATGAGGAAGATTCGACACAAAAATGTTGTTCAGTTCATCGGCGCTTGTACTAGGCCCCCAAATCTTTGTATTGTTACTGAGTTTATGTCTAGGGGAAGCTTGTATGACTTTCTGCACAAACAAAGAGGTGTATTTAAGCTTCCATCTTTGCTAAAAGTAGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGGGACCTCAAGACTGCCAATCTTCTGATGGATGAAAATGAAGTGGTCAAGGTTGCTGATTTTGGGGTTGCCAGAGTGCAAACTCAGTCTGGAGTGATGACAGCTGAAACCGGAACATACCGTTGGATGGCTCCTGAGGTCATTGAACACAAACCATATGACCAGAAGGCAGATGTTTTCAGTTTTGGAATAGCTCTTTGGGAGCTTTTAACCGGAGAACTGCCTTACTCTTGCTTGACCCCATTACAAGCAGCAGTTGGCGTGGTGCAGAAGGGCCTACGGCCTACAATTCCCAAAAACACACACCCGAGACTTTCTGAACTGCTTCAGCGGTGCTGGCAACAAGATCCGACGCAGAGACCAAATTTCTCTGAAATAATAGAAATTCTTCAGCAGATAGCAAAAGAGGTCAATGATCACAAAGATAAGTCATCCCATGGCTTTCTCTCAGCTCTTAGACGGGCCCATCATAATTGA 1719 0.4444 MVIEHDIESCGSRAVQSSHAHHPRHHRQKLEVYNEVLRRIQESDCEEAHVPGFDDQLWLHFNRLPARYALDVNVERAEDVLAHKRLLKLAEDPASRPAFQVRLVQVYPFGGANYADSINSDPSEKEDAQSSLNYSLKQGIHPPPTFGSSSNLEALALQTTKNSIEDGGSAMSVTPYFRPMHEITFSTVDKPKLLSQLTAILGEMGLNIQEAHAFSTTDGFSLDVFVVEGWPNEETEELKGVLENEIYKVKEQNMSNQGIHYAANEQSQARMEHSPHCIQIPSDGADVWEIDTNQLKYENKVGSGSFGDLYRGTYCSQDVAIKVLKPERISTDMLREFAQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMSRGSLYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYSCLTPLQAAVGVVQKGLRPTIPKNTHPRLSELLQRCWQQDPTQRPNFSEIIEILQQIAKEVNDHKDKSSHGFLSALRRAHHN 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01677 572 SUPERFAMILY Protein kinase-like (PK-like) 274 544 IPR011009 -
Pumo8g01677 572 Gene3D Phosphorylase Kinase; domain 1 285 373 - -
Pumo8g01677 572 SUPERFAMILY ACT-like 180 247 IPR045865 -
Pumo8g01677 572 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 158 552 - -
Pumo8g01677 572 SMART serkin_6 295 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01677 572 ProSitePatterns Protein kinases ATP-binding region signature. 301 322 IPR017441 GO:0005524
Pumo8g01677 572 ProSiteProfiles Protein kinase domain profile. 295 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01677 572 CDD ACT_TyrKc 180 246 - -
Pumo8g01677 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Pumo8g01677 572 Pfam Protein tyrosine and serine/threonine kinase 295 544 IPR001245 GO:0004672|GO:0006468
Pumo8g01677 572 PRINTS Tyrosine kinase catalytic domain signature 515 537 IPR001245 GO:0004672|GO:0006468
Pumo8g01677 572 PRINTS Tyrosine kinase catalytic domain signature 406 424 IPR001245 GO:0004672|GO:0006468
Pumo8g01677 572 PRINTS Tyrosine kinase catalytic domain signature 471 493 IPR001245 GO:0004672|GO:0006468
Pumo8g01677 572 PRINTS Tyrosine kinase catalytic domain signature 452 462 IPR001245 GO:0004672|GO:0006468
Pumo8g01677 572 PRINTS Tyrosine kinase catalytic domain signature 369 382 IPR001245 GO:0004672|GO:0006468
Pumo8g01677 572 FunFam serine/threonine-protein kinase HT1 374 564 - -
Pumo8g01677 572 Coils Coil 232 252 - -
Pumo8g01677 572 ProSiteProfiles ACT domain profile. 182 257 IPR002912 -
Pumo8g01677 572 Gene3D Transferase(Phosphotransferase) domain 1 374 568 - -
Pumo8g01677 572 FunFam Serine/threonine-protein kinase isoform 1 285 373 - -
Pumo8g01677 572 CDD STKc_MAP3K-like 301 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01677 Pumo-Chr8 52794448 52802366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01677 8 570 MAP Kinase Kinase Kinase AT4G35780 71.178 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pumo8g01677 PK_Tyr_Ser-Thr 1.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01677 - - gmx:100816767 1136.71