Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01670 ATGGCTTCCCTCGATGATCATAAAACTAATGAAATCTCACTGAACCATGTTGAGATTCCTATCCATGCAATTGGTGTAGAGCCAAAACCAAACCAAGAGGTTGAAGAGAGAAACATTGACTACTCTCAGAGAGCACAATGGCTCCGTGCAGCTGTATTGGGAGCCAATGATGGGTTAGTCTCAGTTGCAGCATTGATGATGGGTGTTGGAGCTGTTAAGGAAAACATCACAGCCATGCTTCTTGCTGGCTTTGCAGGCCTAATTGCTGGGGCATGTAGCATGGCAATTGGGGAGTTTGTTTCTGTGTACACTCAATATGACATAGAAATTGCTCAAATTAAAAGAAATAAAGAAAATAATATTGGTGGATCAGTAGGTGAAGAAAAATTGCCAAATCCATTTCAGGCTGCTCTAGCATCAGCACTAGCATTTTCTGTGGGTGCAGTGGTACCACTACTAGCAGCTGCATTCATAAGGAACTATAAAATTAGGCTTCTTGTTGTTGCTGTTGTAGCTAGCCTGACATTGTTGCTGTTTGGTGGGGTAGGAGCAGTGCTTGGAAAAACTCCAGTGAGAAAGTCTTGTATCAGAGTGCTCATTGGAGGTTGGATGGCTATGACTGTAACTTTTGGCCTCACCAAGTTATTTGGCTTTGCTGGGCTTTGA 666 0.4309 MASLDDHKTNEISLNHVEIPIHAIGVEPKPNQEVEERNIDYSQRAQWLRAAVLGANDGLVSVAALMMGVGAVKENITAMLLAGFAGLIAGACSMAIGEFVSVYTQYDIEIAQIKRNKENNIGGSVGEEKLPNPFQAALASALAFSVGAVVPLLAAAFIRNYKIRLLVVAVVASLTLLLFGGVGAVLGKTPVRKSCIRVLIGGWMAMTVTFGLTKLFGFAGL 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01670 221 Pfam VIT family 48 118 IPR008217 GO:0005384|GO:0030026
Pumo8g01670 221 Pfam VIT family 127 213 IPR008217 GO:0005384|GO:0030026
Pumo8g01670 221 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 31 216 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01670 Pumo-Chr8 52676100 52676765 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01670 32 221 Nodulin-like Gene Family AT3G43660 65.263 6.24e-89 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01670 K22736 - gmx:100817158 355.91