Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01660 ATGGTGATATCAGATGAGAACAGTTCCAAACCAATCAACCCCACAAGTTTTCAAGGAGGGATAGAATGTGTGGGGAACAGAAAGTTGGGGCAGAACAGAAGGGCGTTAAGCGTGATCAATCGGGATCTGGTGGCGGAAGGGAGACCTTACCCTTGTGTTGTTAACAAGAGGGCATTGGAAGAAAAACATGATGTTTGTGAGAAGAAGCAGGCGGATCCGGTGCATCGACCCATCACAAGGAGGTTTGCTGCACAAATTGCTAGCACACAGAAAAATCGTGCTGAGGGAACCAAGAAGTCAAACTTGGGGAATTCAAATTCGAATGGATTTGGAGAGAGTATATTTGTCGATGATGAACACAAGCCAACAACGGATGACCAGCCAGTGCCCATGTCTTTGGAGCAGACAGAACCAATGCATAGTGAATCAGATCAGATGGAGGAGGTTGAGATGGAGGATATAATTGAAGAGACTGTTTTGGACATTGATACCTGTGATGCAAATAACCCTCTTGCAGTCGTGGACTATATTGAAGATCTTTATGCCTACTACAGAAAAATGGAGGGTACTAGCTGTGTCTCACCGAATTATATGGCACAACAATTTGACATTAATGAGAGGATGAGGGCTATATTGATTGACTGGCTTATTGAGGTGCACGACAAATTTGACCTCATGCACGAGACATTGTTTCTCACAGTCAATCTTATAGATCGATTTTTGGCAAAGCAGACAGTGGTAAGAAAGAAGCTTCAGCTGGTTGGTCTAGTTGCTATGCTTTTGGCATGCAAGTATGAAGAAGTTTCAGTACCTGTGGTGGGGGATCTAATTCTCATATCAGACAAAGCATACACTAGGAAGGAAGTTCTGGAAATGGAGAAGTTGATAGTCAACACATTGCAGTTTAACATGTCTGTGCCAACAGCATATGTTTTTATGAAAAGGTTCCTAAAGGCAGCTCAAGCAGACAGAAAGCTTGAGCTACTGGCTTTCTTCCTGGTAGAGCTATCTCTAGTGGAATATGAGATGCTGAAGTTCCCTCCATCTCTGCTAGCAGCAGCTGCTGTTTATACAGCGCAATGCACTATTTATGGTTTCAAACAATGGAGTAAAACCTGTGAATGGCACTCCAATTACTCAGAAGATCAACTATTAGAGTGCTCTACCTTAATGGTTGATTTTCATCAGAAGGCTGGGAATGGGAAACTTACTGGGGTACATAGGAAGTACTGCTCATCTAAATTTAGCTATACTGCAAAGTGTGAACCAGCACGTTTTCTTCTGGAGAACCCATTGTAG 1299 0.4296 MVISDENSSKPINPTSFQGGIECVGNRKLGQNRRALSVINRDLVAEGRPYPCVVNKRALEEKHDVCEKKQADPVHRPITRRFAAQIASTQKNRAEGTKKSNLGNSNSNGFGESIFVDDEHKPTTDDQPVPMSLEQTEPMHSESDQMEEVEMEDIIEETVLDIDTCDANNPLAVVDYIEDLYAYYRKMEGTSCVSPNYMAQQFDINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLAKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVLEMEKLIVNTLQFNMSVPTAYVFMKRFLKAAQADRKLELLAFFLVELSLVEYEMLKFPPSLLAAAAVYTAQCTIYGFKQWSKTCEWHSNYSEDQLLECSTLMVDFHQKAGNGKLTGVHRKYCSSKFSYTAKCEPARFLLENPL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01660 432 PANTHER CYCLINS 136 397 IPR039361 -
Pumo8g01660 432 MobiDBLite consensus disorder prediction 88 133 - -
Pumo8g01660 432 Gene3D - 179 419 - -
Pumo8g01660 432 SMART cyclin_7 214 298 IPR013763 -
Pumo8g01660 432 SMART cyclin_7 311 393 IPR013763 -
Pumo8g01660 432 PIRSF Cyclin_A_B_D_E 22 432 IPR046965 GO:0016538|GO:0044772
Pumo8g01660 432 ProSitePatterns Cyclins signature. 209 240 IPR006671 -
Pumo8g01660 432 CDD CYCLIN_AtCycB-like_rpt1 156 302 - -
Pumo8g01660 432 CDD CYCLIN_AtCycB-like_rpt2 307 423 - -
Pumo8g01660 432 Gene3D - 193 305 - -
Pumo8g01660 432 Pfam Cyclin, N-terminal domain 179 305 IPR006671 -
Pumo8g01660 432 MobiDBLite consensus disorder prediction 88 112 - -
Pumo8g01660 432 FunFam G2/mitotic-specific cyclin-1 284 419 - -
Pumo8g01660 432 Pfam Cyclin, C-terminal domain 307 422 IPR004367 -
Pumo8g01660 432 SUPERFAMILY Cyclin-like 168 304 IPR036915 -
Pumo8g01660 432 SMART Cyclin_C_2 307 424 IPR004367 -
Pumo8g01660 432 SUPERFAMILY Cyclin-like 306 424 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01660 Pumo-Chr8 52504704 52507826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01660 1 428 Core Cell Cycle Gene Families AT1G20610 60.183 2.67e-179 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01660 K21777 - gmx:100798068 820.846