Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01647 ATGGGAGGCTTATTACACTTTTTTGAATTCAATCAGGGGAGGATGGCCAAAAAAGTCCTTGCTCGTAAGAGACATCATGGTGGCCTGGAAGCTCCTCGAAATAGTCTTGATCTGCAAGTACAAACACCTCAAAACTACTGTCCAGAAGGAGAATTATCATACAATTATCAAGTAGAAGAAGAAGAGGGCATGTCTGAGAATAACCGTTATTCAAATGTGGGTTCAATGAAAAAACTGATCAATGAGGAGCTATCCAAACAATCAAGCACCAGACAAAATGCGCCAAGCCTTGTGGCAAGGTTGATGGGGATAGATACAATGCCATTAGACACTAAATATGTTGTTCCATCAGATAAAAAAATAAGTGAAAACATGGTGAAGAGGTCTTCAGTCAAAGGAGTGAATCGAAGGGGTTCAGTTAGTTGGGGCTCTTCCAACTTTAATTCTTCTAGCCGCATGGATTTTGATTCGTTATATGAAGACATAGGTGATGATGATGATGATGGATGGAACCGGAGTTTTGGAGAACCAAGGCTGCGGGAACATCCTCAGGAAGAGGAACTCCAGAAATTCAAGAAAGAGTTTGAAGCATATCAAGCAGCAAGGTTTCTGGAGTGTTCAAAGGTTGCTGAAATTGGCAGTGCTCCTAGACGATTGCTTGCTCAAGAAAACCTGAACAAGGAAAAGGTGATGCATAATGACTCAGTTTTACAAAGAGCAGCAGCAGGGAAACTTGCAGATCTTGACAGCCATTCATTCAAAACAACGTCACCTCACAGTTATGGTTCAGAGTATCATGGTAACATGATGGAGTTAATCCCAGCTATGCAAAGGAAAACCTTTCCTCCAAGGAGCAGAACACTAAGTAGAGACTTTGAGGAGTCCTTAATGATGAAATCTTGCAACAAATTAGACACGTCTTCATCTCCCACTAGGATAGTTATCTTGAAGCCTGGTCCTACTGATAGCATTTGCAACCATGAAGAGAATTGGACCATATCATCGGGAACTATACAAGGGAGAAATAGTATAGAAGATTTTCTTGAAGAGGTGAAAGAGCGTTTGAAATGTGAACTGCAAGGGAAAATTGTCAAAAAGGGTTCTGTGGTTCGAGGGAGTGGAATTGAGACACCTTACAATGAAAAACCATCTGATCCTAAACTAATAGCCCGTCACATAGTAAAGCAAGTCAGAGAAAGTGTGACTAGAGATGCTGACACAAATTTACTCCACTCAGAATCAACAGGATCATACAAAAGTGAAATGCAGTTCAATGGACCAAGCTCCCCAGAATTTATCAGCAGAGATACCAGGAGGTTCTTGTCAGAGAGGCTAAGAAATGTTGTGAGAAGTGAAGCACATGCTGACATTCCTGAGGGAAAATCAAGGTCACTTGCATTAGACAACCATAAAGCTAGACTAAAGCAAGTGGGGGATATTATGAAGTATGCAAGTAACTGGGAAATTTCCAAAGAGGACACATCAATACAAACAGGATCTTTCAGGCATGAACTCGATGAGAATATATTTCTCCACAAGGAGTTGTCCCCAAGAAACCTTGTAAGATCCTTGTCTGCTCCTGTATCACGTTCAGGAACATCATTTGGCAAGCTTCTTCTAGAGGACCGCCACATTTTAACTGGTGCTCAGATTCGGAGGAAGCTTGAAGCTGTTGAAACTATGTCTGCTGATGTCAAGAAACGGAAAAAGGATAGATTCAATATTAAAGAAAGAGTCTCCAATTTTAGATATAATCTTGCTTTAAGAGGGAGGCTTTTTGGCAGAAGGGTTCAATCAATGGTAGAATCACATGGCAATGAATTTGGTCCCATTGTGAGAGATGTCACAAGTGGACCAACAGTTCTCATGAACTGTGGTGAGAGGCATGAGAACTCCACTGAGGTACCTCCTAGTCCTGCATCTGTGTGCAGCAGTGTTCATGAAGACTTTTGGAGGCGGACTGAATATTTAAGTCCAATATCAACTCCTGATGTGTCTTCAAGTGACGATAATGTTGTGCCCCAGGTTTTCAGGGATATCAGCTCTGGTTTGAATGAGCTAAGGAGACAACTCAATCAACTTGAATCTGATGGTCCTGAGGACTTGACTATGAAACAGGAGCCTGCTGAGTCTGACTTAGACCAATTAGAGGATCCAGCAGAATCTTACATAAGAGATCTACTTGTTGCTTCTGGTCTGTACTTTGGTTCATGGGATAAATCTTTATTAAGAGGGGACACATTTGCAAAGCCTATTGGCAACTCTGTTTATGAAGAAGTGGAAGAATCTCACAAGAAATTGGTCAAGGAAAATGATGAAAGCTGTATGAAGGATCAGAATGAGAATAAGCTAGACCACAAAGTTTTGCTTGATTTGTTAAATGAGGCACTTTCAGTTGTTCTTGGACCTCCTTTGACATTGTCCAGATTCAGAAGGAAATTAAGCAACTCTTCCATGTTGCCACCTTCTGGAAAGGAACTGTTGAACTTAGTGTGGGACATTATCCGTGTTTCTTTATATCCTCCATCTGACATATCTACTTATTCACTTGATACTTTGGTGGCTCAACACCTAGGATCCATCCCTTGGTCTGGATTAATAAATGATGAGATCAATATTTTGGAAAGAGATATAGAATGTCTAATAACTGATGATCTGGTTGAAGAACTCACAAAGGATATGTTCTAA 2688 0.4081 MGGLLHFFEFNQGRMAKKVLARKRHHGGLEAPRNSLDLQVQTPQNYCPEGELSYNYQVEEEEGMSENNRYSNVGSMKKLINEELSKQSSTRQNAPSLVARLMGIDTMPLDTKYVVPSDKKISENMVKRSSVKGVNRRGSVSWGSSNFNSSSRMDFDSLYEDIGDDDDDGWNRSFGEPRLREHPQEEELQKFKKEFEAYQAARFLECSKVAEIGSAPRRLLAQENLNKEKVMHNDSVLQRAAAGKLADLDSHSFKTTSPHSYGSEYHGNMMELIPAMQRKTFPPRSRTLSRDFEESLMMKSCNKLDTSSSPTRIVILKPGPTDSICNHEENWTISSGTIQGRNSIEDFLEEVKERLKCELQGKIVKKGSVVRGSGIETPYNEKPSDPKLIARHIVKQVRESVTRDADTNLLHSESTGSYKSEMQFNGPSSPEFISRDTRRFLSERLRNVVRSEAHADIPEGKSRSLALDNHKARLKQVGDIMKYASNWEISKEDTSIQTGSFRHELDENIFLHKELSPRNLVRSLSAPVSRSGTSFGKLLLEDRHILTGAQIRRKLEAVETMSADVKKRKKDRFNIKERVSNFRYNLALRGRLFGRRVQSMVESHGNEFGPIVRDVTSGPTVLMNCGERHENSTEVPPSPASVCSSVHEDFWRRTEYLSPISTPDVSSSDDNVVPQVFRDISSGLNELRRQLNQLESDGPEDLTMKQEPAESDLDQLEDPAESYIRDLLVASGLYFGSWDKSLLRGDTFAKPIGNSVYEEVEESHKKLVKENDESCMKDQNENKLDHKVLLDLLNEALSVVLGPPLTLSRFRRKLSNSSMLPPSGKELLNLVWDIIRVSLYPPSDISTYSLDTLVAQHLGSIPWSGLINDEINILERDIECLITDDLVEELTKDMF 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01647 895 Pfam Domain of unknown function (DUF4378) 722 889 IPR025486 -
Pumo8g01647 895 Coils Coil 677 697 - -
Pumo8g01647 895 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 894 - -
Pumo8g01647 895 Pfam DUF761-associated sequence motif 90 108 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01647 Pumo-Chr8 52101374 52107603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01647 76 894 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 40.771 4.01e-158 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01647 - - gmx:100779720 1601.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01647 8 52101374 52107603 Pumo8g01647 8 52101374 52107603 ECH