Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01634 ATGTCGTGTTCGTCGTCATCGGGGTCGGAGGAAGACGATGAGGGATTCGACTCTTACCGGAAAGGAGGGTACCACGCCGTCAGAGTCGCCGATCAGTTCGCCGCCGGCAGGTACATAGCGCAGAGGAAGTTGGGGTGGGGCCAGTTCTCCACCGTGTGGCTCGCTTACGATACTAAAACTTCGTCATATGTTGCTCTCAAGATCCAGAAAAGTGCGGCCCAGTTTGTTCAGGCTGCCCTTCACGAGATCGATGTTCTTTCATCCATTGCTGACCATGACCCATCAAATTCAAAATTTGTCATTCAATTGATTGACCACTTTAAGCACACGGGTCCAAATGGGCAGCATCTTTGCATGGTCCTTGAGTTTCTTGGTGATAGCTTGCTTCGTTTGATCAGATATAACCGTTACAAAGGTCTTCCATTGAATAAAGTTAGAGAGATTTGCAAATGTGTTTTGATTGGTTTGGATTACTTGCATACTGATCTTGGTATAATCCACACTGACCTAAAACCTGAAAACATTCTTCTATGTTCAACCATTGACCCTGCCAAAGACCCTTTAAGATCTGGACTTGACCCAATTCTAGAGCGACTTGAGGGAAACACAAATGGTGGAGTTACAAGTCTTATTGAGAAAAGGTTGAAAAGGAGAGCAAGGACAGCAGTTGCTAAGATATCTGGAAGAAGAGCGTCAATGGGAGGAACAGGAGATGTTACAAAGACTGGTAGAAATATTGATGGGATTGATGTGAGATGCAAGATAGTAGATTTTGGAAATGCTTGTTGGGCTGATAAGCAGTTTGCAGAAGAAATACAGACAAGGCAGTACAGAGCACCTGAAGTTGTACTGCAGGCTGGCTATTCCTTCTCTATTGACATGTGGTCTTTTGCTTGCATTGCTTTTGAACTTGCCACTGGAGATATGTTGTTTACACCCAAGGGCGGACAAGGTTTTAGTGAGGATGAGGATCACCTTGCCCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGATTGCTACTGGTGGTGGAGCTCAATCCAAGGATTTCTTTGACAGGCATGGGGATCTAAAAAGGATTCGAAGGCTAAAATTTTGTCCACTTGACAAATTGCTGACTGAAAAATATAAATTTTCAGTGAATGATGCTCGGGAGTTTTCAGAATTTCTTTTACCACTCTTTGATTTTGCGCCAGAGAAGCGACCAACCGCGCGACAGTGCCTGCAACACCCATGGCTGAACTGCACGGAATCTCCTCCAAATGAAATGAGCAATGAATCTGCTGTGGAAAAGGTGGATGTTGGGATGAGCAACCTTAAAATCAGGGTGGGAAAGTGA 1341 0.4497 MSCSSSSGSEEDDEGFDSYRKGGYHAVRVADQFAAGRYIAQRKLGWGQFSTVWLAYDTKTSSYVALKIQKSAAQFVQAALHEIDVLSSIADHDPSNSKFVIQLIDHFKHTGPNGQHLCMVLEFLGDSLLRLIRYNRYKGLPLNKVREICKCVLIGLDYLHTDLGIIHTDLKPENILLCSTIDPAKDPLRSGLDPILERLEGNTNGGVTSLIEKRLKRRARTAVAKISGRRASMGGTGDVTKTGRNIDGIDVRCKIVDFGNACWADKQFAEEIQTRQYRAPEVVLQAGYSFSIDMWSFACIAFELATGDMLFTPKGGQGFSEDEDHLALMMELLGKMPRKIATGGGAQSKDFFDRHGDLKRIRRLKFCPLDKLLTEKYKFSVNDAREFSEFLLPLFDFAPEKRPTARQCLQHPWLNCTESPPNEMSNESAVEKVDVGMSNLKIRVGK 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01634 446 FunFam Serine/threonine-protein kinase SRPK 117 414 - -
Pumo8g01634 446 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Pumo8g01634 446 Pfam Protein kinase domain 252 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01634 446 Pfam Protein kinase domain 39 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01634 446 ProSiteProfiles Protein kinase domain profile. 38 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01634 446 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 8 204 - -
Pumo8g01634 446 CDD STKc_SRPK 27 414 - -
Pumo8g01634 446 SUPERFAMILY Protein kinase-like (PK-like) 32 422 IPR011009 -
Pumo8g01634 446 FunFam Protein kinase superfamily protein 24 123 - -
Pumo8g01634 446 SMART serkin_6 38 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01634 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Pumo8g01634 446 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Pumo8g01634 446 Gene3D Transferase(Phosphotransferase) domain 1 92 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01634 Pumo-Chr8 51686128 51690473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01634 4 415 EF-hand Containing Proteins AT5G22840 50.862 2.69e-165 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Pumo8g01634 Pkinase 2.8e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01634 K08832 - gmx:100784192 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01634 8 51686128 51690473 Pumo8g01634 8 51686128 51690473 ECH