Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01631 ATGAGTGGTGTTGGTGGTGGGTGCCCCTGCCCAAGGGGCAATAGTGAGTGTTCCATGGAGGATCTGAATGGTGATACGGTGGGGAATTTGAATCAGAATGTTGGCAAACCTCCAAGGGACCATTCGGTTAATCGCCATTTCAGCAGCTCTTCTTGGTCTGCTGAACCGGAAACAAATATTAATATGATTGGATTTAAATCAAGCACAGAAGAAAAATCAGACTTTTCACTTGTATTGCGATCTGGAAGTTGTTCTGATAAAGGACCAAAGCAGTACATGGAGGATGAGTTCATATGTGTTGATGTTCTTCATGAATGTGTCGGTCCAAGAGCAGACCTTCCTTCTCCTGCAGCATTTTATGGGGTATTTGATGGACATGGTGGTGTTGATGCAGCATCATTTACCAGAAAGAACATTCTCAAGTTTATAGTTGAAGATGCTCATTTCCCAGCTGGCATTAAGAAAGCAGTTAAATGTGCATTTGTGAAGACTGATCTTGCATTTAGAGATGCTAGTTCTCTTGATAATTCTTCAGGCACCACCGCTCTAATAGCCCTTATGTTGGGAAGTTCCATGCTTATTGCCAATGCAGGAGATTCTCGTGCTGTATTGGGAAAACGGGGCAGAGCCATTGAACTTTCCAAAGACCATAAACCAAATTGCACTTCTGAAAGATTAAGAATTGAGAAACTAGGTGGTGTCATCTATGATGGATACCTCAATGGCCAGCTATCAGTGGCGCGTGCTCTTGGAGATTGGCACATCAAAGGTACTAAAGGTTCTAAGAGCCCTTTAAGCTCCGAGCCGGAGCTAGAGGAGATTGTGCTGACAGAAGAAGATGAGTTTTTGATAATGGGTTGTGATGGATTGTGGGATGTGATGAGTAGCCAGTGTGCTGTTACAATGGTGAGGAGGGAGCTCATGCAGCATAATGATCCCAACACATGTGCAAAAGTACTTGTTGCTGAGGCCCTCCAACGCAACACGTGTGACAATCTAACAGTTGTGGTGGTGTGTTTCTCCAAAGATCCACCTCCTAAAATTGAAATTCCTAGATCATATAGGAGGAGGAGTATTTCTGCTGAGGGCCTTGATCTTCTCAAGGGTGTCTTGAATGGTAGATGA 1125 0.4391 MSGVGGGCPCPRGNSECSMEDLNGDTVGNLNQNVGKPPRDHSVNRHFSSSSWSAEPETNINMIGFKSSTEEKSDFSLVLRSGSCSDKGPKQYMEDEFICVDVLHECVGPRADLPSPAAFYGVFDGHGGVDAASFTRKNILKFIVEDAHFPAGIKKAVKCAFVKTDLAFRDASSLDNSSGTTALIALMLGSSMLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGTKGSKSPLSSEPELEEIVLTEEDEFLIMGCDGLWDVMSSQCAVTMVRRELMQHNDPNTCAKVLVAEALQRNTCDNLTVVVVCFSKDPPPKIEIPRSYRRRSISAEGLDLLKGVLNGR 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01631 374 ProSitePatterns PPM-type phosphatase domain signature. 119 127 IPR000222 GO:0043169
Pumo8g01631 374 FunFam Probable protein phosphatase 2C 22 65 343 - -
Pumo8g01631 374 Pfam Protein phosphatase 2C 82 332 IPR001932 -
Pumo8g01631 374 Gene3D - 64 344 IPR036457 -
Pumo8g01631 374 ProSiteProfiles PPM-type phosphatase domain profile. 80 340 IPR001932 -
Pumo8g01631 374 SUPERFAMILY PP2C-like 74 341 IPR036457 -
Pumo8g01631 374 CDD PP2Cc 80 340 IPR001932 -
Pumo8g01631 374 SMART PP2C_4 70 338 IPR001932 -
Pumo8g01631 374 MobiDBLite consensus disorder prediction 21 54 - -
Pumo8g01631 374 PANTHER PROTEIN PHOSPHATASE 2C 67 338 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01631 Pumo-Chr8 51672211 51675288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01631 63 372 PP2C-type Phosphatase Gene Family AT3G51470 79.355 1.48e-177 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01631 K14803 - gmx:100786416 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01631 8 51672211 51675288 Pumo8g01631 8 51672211 51675288 ECH