Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01630 ATGGGTTCTTTTCAAATGGGGATGGCAGCGCATAATTCCACAATACCAGATTTTGTAAATATTGGGGCTCTCTTCTCTTTCAATACCAGTGTTGGTAGAAGTATAAAAATTGCTATAGAAGCTGCGATTGAAGATATAAATTCTGATCCTACTATTCTTGGTAAAACCAAGCTGAACCTCTCACTGCAAGAAGATTCTAAGTATAGAGGTTTCCTGAGCATTGCTGAGGTTTTGCAGGTCATGGCAAGACGCACGGTGGCAATAATAGGCCCCCATAGCTCTGTAACAGCTCATGTCATAACTCATATTGCAAATGAGCTCCAAGTTCCTCTGCTGTCATTCTCAGCTTTGGACCCTACCCTTTCTTCACTTCAATTCCCGTTCTTCATCAGAACTTGTCATAGTGATCTTTATCAAATGGCTGCAATAGCAGACCTTGTTGACTACCATAATTGGAAAGATGTTATTGCTGTCTACCTTGATGATGATAATGGGAGAAATGGAATTGGCGCATTAGGCGATAAGCTTGCTGAGAGGCGTTGCAGGATATCATTTAAAGCACCTTTGAGCCCCGATGCATCTATGGAAGAGATTACTAATGTGCTTGTTCAGGTGGCTCTGGCAGAATCACGGGTAATAGTTGTTCATGCGAATACTCAATTTGGCCCCAAGGTGTTTAGTGTTGCAAAGAATCTTGGGATGATGAGAACTGGGTATGTCTGGATAGCCACTGCTTTCCTCTCTGCTCTGCTTGATATCAACGGTCCCTTCTCTTCAGATTCATTGGATGAAATTCAAGGAGTTCTTACGCCACGTATGTACACGCCAGATTCACTGCTCAAAAGGAGGTTTGCTTCTAGGTGGAAAAACTGGACTAGTGGAAATACTGCTAATGTCCACCTTGGATTGAGTTTTTTACCTCTCTATGCATATGACACTGTTTATGTGCTTGCTCATGCACTTGATGCATTTTTCAAACAAGGTAACCAAATTACATTCTCAACTGATTCAAAGCTATCTAGCATACATGGAGACAACTTGAATCTTGAAGCCTTGAGAATCTTTAATGAAGGAAATTTGTTACGTAGTAACATCTATGAGGTTAACATGACTGGTGTATCCGGTCCATTCAAGTATACATCTGATAGAAACCTTGTTAATCCTGCATATGAAATCATTAATGTCATTGGAACTGGAACTCGGAGGATCGGTTATTGGTCTAATTACTCTGGACTATCAGTTGTTCCTCCAGAAACTCTTTATTCCAAACCAACCAGTCTTTCCAGGGAAAATCGAAAGTTGTTCCCTCCTATTTGGCCTGGAAACACAGATGAGAGACCCCGTGGTTGGGTTTTTCCAAACAATGGAAGGCTCTTAAAGATTGGAGTACCAAAAGGTGTTAGTTACAATGAATTTGTCTCGCAAATAAAAGGCACTGATATGTTTGAGGGATTCTGCATTGATGTATTTCTTGCTGCAGTGAACCTGTTGTCTTATGCTGTCCCGTATCAGTTTGTCGCATATGGGGATGGTAAGAACAATCCTAGTATGACTGAGCTTGTCCATCTGATCACAACGGGTGAATTTGATGGTGCAGTAGGTGACATTGCAATTACTACAGAAAGAACAAGGATGGTGGATTTTACTCAGCCATATATTGAGTCTGGTCTAGTGGTAGTAGCACCGGTTAGGAGAGCAGAATCCAATGCTTTGGCCTTTTTGGCCCCTTTTACACCAAAGATGTGGTGTGTCACAGCTATCTTTTTCATATTAGTGGGAGCTGTTGTTTGGATTTTGGAGCACAGGGTGAATGATGAATTTAGAGGACCACCCAAAAAACAAGTAGTTACTGTTTTATGGTTTAGTTTTTCAACAATGTTCTTTTCCCAGAGGGAAAATACAGTGAGCACACCTGGTCGCTTTGTGTTGATTATATGGTTATTTGTGGTTCTTATAATTAACTCGAGTTACACGGCAAGTCTAACCTCAATCCTCACAGTGCAACAGCTTTCTTCGCCCATTAAAGGCATTGAAAGTTTAGTAAATGGCAAAGAGCCTATTGGGTACACGCAGGGTTCTTTTGCTAGAAATTATTTAGTTAAGGAAATTGGTATTGAAGAGTCCAGGCTTGTTCCTCTAACAACACCAGAAGAAGCTGCCGAAGCACTGAGAAATGGTCCCCAAAATGGGGGTGTTGCTGCTTACATTGATGAGCGTGCCTACACTGACATCTTCCTCTCCAGCCGTTGTGATTTAACTGTTGTAGGTCAAGAGTTCACCAGAAACGGTTGGGGATTTGGCTTTCCACGGGACTCGCCATTAGCAGTTGACCTATCAACTGCCATATTGCAGATGATAGATAATGGAGATTTACAAAGGATCCATGACAAATGGCTTTTGAGTAGTGCTTGCTTATCACAAGGTTCAAAGCTTGATGTGGAAAGACTCCAACTTAAAAGCTTTTGGGGCCTCTATGTGATCTGTGGGCTTGCCTGCTTGGTTGCACTCTTCATATATCTTATACAGATTTGGAGGCAATACCACAAGCACTATGTCTCAGAGGAACTTGACTCCACTGATGGCCAAAGCATAGGATCAAAATCTTTGCGTCTTAAGACTTTCCTTTCATTTGTAGACGAAAAAGAAGAGACCGTTAAGAGCCGGTCCAAGAGAAGGAAAATGGAGAGGATCTCATACAGAAGCAGTGAAGGAAGCTCATCCATCAGCTCCAGTAAGGGATATGCTTCACGCAGAAATGAATGTGCTACCGAAGTATGA 2778 0.4183 MGSFQMGMAAHNSTIPDFVNIGALFSFNTSVGRSIKIAIEAAIEDINSDPTILGKTKLNLSLQEDSKYRGFLSIAEVLQVMARRTVAIIGPHSSVTAHVITHIANELQVPLLSFSALDPTLSSLQFPFFIRTCHSDLYQMAAIADLVDYHNWKDVIAVYLDDDNGRNGIGALGDKLAERRCRISFKAPLSPDASMEEITNVLVQVALAESRVIVVHANTQFGPKVFSVAKNLGMMRTGYVWIATAFLSALLDINGPFSSDSLDEIQGVLTPRMYTPDSLLKRRFASRWKNWTSGNTANVHLGLSFLPLYAYDTVYVLAHALDAFFKQGNQITFSTDSKLSSIHGDNLNLEALRIFNEGNLLRSNIYEVNMTGVSGPFKYTSDRNLVNPAYEIINVIGTGTRRIGYWSNYSGLSVVPPETLYSKPTSLSRENRKLFPPIWPGNTDERPRGWVFPNNGRLLKIGVPKGVSYNEFVSQIKGTDMFEGFCIDVFLAAVNLLSYAVPYQFVAYGDGKNNPSMTELVHLITTGEFDGAVGDIAITTERTRMVDFTQPYIESGLVVVAPVRRAESNALAFLAPFTPKMWCVTAIFFILVGAVVWILEHRVNDEFRGPPKKQVVTVLWFSFSTMFFSQRENTVSTPGRFVLIIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLVNGKEPIGYTQGSFARNYLVKEIGIEESRLVPLTTPEEAAEALRNGPQNGGVAAYIDERAYTDIFLSSRCDLTVVGQEFTRNGWGFGFPRDSPLAVDLSTAILQMIDNGDLQRIHDKWLLSSACLSQGSKLDVERLQLKSFWGLYVICGLACLVALFIYLIQIWRQYHKHYVSEELDSTDGQSIGSKSLRLKTFLSFVDEKEETVKSRSKRRKMERISYRSSEGSSSISSSKGYASRRNECATEV 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01630 925 CDD GluR_Plant 459 799 - -
Pumo8g01630 925 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 19 879 IPR015683 -
Pumo8g01630 925 Gene3D - 570 696 - -
Pumo8g01630 925 SUPERFAMILY Periplasmic binding protein-like I 15 451 IPR028082 -
Pumo8g01630 925 Pfam Bacterial extracellular solute-binding proteins, family 3 480 799 IPR001638 -
Pumo8g01630 925 Gene3D - 37 387 - -
Pumo8g01630 925 Gene3D - 453 569 - -
Pumo8g01630 925 SUPERFAMILY Periplasmic binding protein-like II 440 801 - -
Pumo8g01630 925 CDD PBP1_GABAb_receptor_plant 20 416 IPR044440 -
Pumo8g01630 925 MobiDBLite consensus disorder prediction 881 925 - -
Pumo8g01630 925 FunFam Glutamate receptor 454 570 - -
Pumo8g01630 925 FunFam Glutamate receptor 570 700 - -
Pumo8g01630 925 Gene3D - 135 412 - -
Pumo8g01630 925 SMART GluR_14 460 801 IPR001320 GO:0015276|GO:0016020
Pumo8g01630 925 FunFam Glutamate receptor 135 285 - -
Pumo8g01630 925 Pfam Ligand-gated ion channel 800 832 IPR001320 GO:0015276|GO:0016020
Pumo8g01630 925 Pfam Receptor family ligand binding region 37 397 IPR001828 -
Pumo8g01630 925 MobiDBLite consensus disorder prediction 900 917 - -
Pumo8g01630 925 Gene3D - 746 806 - -
Pumo8g01630 925 FunFam Glutamate receptor 696 803 - -
Pumo8g01630 925 PIRSF IGluLR_plant 2 924 IPR017103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01630 Pumo-Chr8 51662202 51667427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01630 7 902 Ion Channels AT3G51480 57.414 0.0 1080
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01630 K05387 - gmx:100785258 1678.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01630 8 51662202 51667427 Pumo8g01630 8 51662202 51667427 ECH