Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01629 ATGAAAATCCTTCTGGGGGGGTTTCATTTGAATGCAGAGAATGGGAATGTTTTGGACAGTGGCTTAGATTTTGCTATGCCGTATGCATGTTGGGACATGGAATTGAAGGAAGTCTACCGCCAACGCAAGAATTTTTTGTTACAACATGCTGACCCTAAAAGATTGCCCGATGTTTATCAAGAGAATGATATGCTCCCATCACATACTTCAGAGCTGATGCTTCCATCACAACCTTCTGATCAACCTGATATTGATAGATTTGTCCTTGGTCAAGGTGGTAATATGATGCTACCTTTGCCTGTACCAAATTCTTTGCCCTCTTTGCGACATAAAATCACCTTCTATGAGAGCAATGATAATGTAGCTATGCTCCCTCAGCCTCCTATGGAGATCACTGCACAAGAGGAAGTTGATCCAAACAGGGCGATTGAATGGTCAACAACATTACCCCTTATATTATTTACCATCTTTATTGGCTTTTTTATTTTCTACCACTCTCTAGTGGTTACAAATAAAGACCAAATCAGGGAGTTAAATTCAAAAAGTTTACCTCCTAAGAAGAAGAAAGTACGCAAGTCAGTAAAGAACAATATCACTGTTGACAAACGGGGTAAACCTATGTCATCAGCTGAGGAGGATATACTGACACCTATGTCATCGGCTGAGGAGGATATACTGACACATAAGGAGACAAACACTGATACATATACACAGTTGCGAGTTGATGGACGCAAGATTGGTAAACTATTTGTATCAAATAAAGAAATTGCTAAGGGAAGCAATGGTACCATTGTTTTTGAGGGGACATATGAAGGCCGAGTTGTTGCTGTCAAACGCCTTGTCCAAGCTCATCATGATGTAGCCCATAAAGAAATCCAAAATCTCATTGCATCTGACAGACATCCAAACATTGTCCGATGGCATGGGGTGGAATGTGATCATGATTTTGTTTATCTTGCTCTCGAACGTTGTACATGCAACTTGGACGAGTTGATTCATATGTACTCTGATATATCAGAGAACCCAACAATTAGCAAGGATCAATATTCTAATTTTTTAAAAAATTCTCTAATGGAGACGAGGAATGATATGCAATATCTTTGGAAAGCAAATGGATTTCCATCCCCTCTATTACTGAAACTGATGAGGGATGTAGTTTCTGGGCTTGTTCATTTGCATGAACTAGGAATAATACATCGAGATTTGAAACCCCAAAATGTTTTGATAATAAAAGAAAGATCATTATGTGCAAAGCTTTCTGATATGGGAATTAGTAAACGCCTTCTCGAGGACATGTCTTCTTTGGGTCATACTGTTACAGGCTGTGGCAGTTCAGGTTGGCAAGCACCGGAGCAACTTGTTCAAGGACGTCAAACACGAGCCGTGGATTTATTTAGCTTAGGTTGTGTCCTTTTTTTCTGCATGACTGCAGGACGACATCCATTTGGAGAACGTCTTGAGCGTGATGTCAATATTGTGAAAAATCAAAAGGATCTTTTCTTAGTGGAGTTCATTCCTGAAGCTGAGGATCTTATTTCTTGTTTGTTAAACCCGAACCCAGATCTAAGGCCATCAGCGATTGAAGTATTGCACCATCCTCTTTTTTGGAGTTCTGAGATGAGACTTTCATTTCTTCGGGATGCAAGTGACAGGGTGGAACTTGAGGATAGAGAAACTGATTCTGATCTTTTGAAGGCACTAGAGAACATTGCTCCGCTGGCTTTAGGTGCAAAATGGGATGAGAAGCTAGATCCTGATTTCATCACTAACATTGGTCGTTACAGGAGATATAAATTTGATAGTGTTAGAGACTTGTTGAGGGTCATGAGAAACAAGCTAAATCATTACAGGGAATTGCCTCAAGAAATCCAGGAACTAATAGGACCTGTTCCAGAAGGATTCAATGACTATTTTGCGAGTCGATTTCCAAGGCTCTTGATTGAAGTATACAAAGTTATATACAAAAATTGCAAGGACGATGAATGTTTTCAAAGATATTTTAGATACGTTAACTAG 2016 0.3953 MKILLGGFHLNAENGNVLDSGLDFAMPYACWDMELKEVYRQRKNFLLQHADPKRLPDVYQENDMLPSHTSELMLPSQPSDQPDIDRFVLGQGGNMMLPLPVPNSLPSLRHKITFYESNDNVAMLPQPPMEITAQEEVDPNRAIEWSTTLPLILFTIFIGFFIFYHSLVVTNKDQIRELNSKSLPPKKKKVRKSVKNNITVDKRGKPMSSAEEDILTPMSSAEEDILTHKETNTDTYTQLRVDGRKIGKLFVSNKEIAKGSNGTIVFEGTYEGRVVAVKRLVQAHHDVAHKEIQNLIASDRHPNIVRWHGVECDHDFVYLALERCTCNLDELIHMYSDISENPTISKDQYSNFLKNSLMETRNDMQYLWKANGFPSPLLLKLMRDVVSGLVHLHELGIIHRDLKPQNVLIIKERSLCAKLSDMGISKRLLEDMSSLGHTVTGCGSSGWQAPEQLVQGRQTRAVDLFSLGCVLFFCMTAGRHPFGERLERDVNIVKNQKDLFLVEFIPEAEDLISCLLNPNPDLRPSAIEVLHHPLFWSSEMRLSFLRDASDRVELEDRETDSDLLKALENIAPLALGAKWDEKLDPDFITNIGRYRRYKFDSVRDLLRVMRNKLNHYRELPQEIQELIGPVPEGFNDYFASRFPRLLIEVYKVIYKNCKDDECFQRYFRYVN 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01629 671 SMART serkin_6 250 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01629 671 Gene3D KEN domain 538 670 IPR038357 -
Pumo8g01629 671 ProSiteProfiles KEN domain profile. 538 669 IPR010513 GO:0004540|GO:0006397
Pumo8g01629 671 Gene3D Phosphorylase Kinase; domain 1 236 322 - -
Pumo8g01629 671 PANTHER IRE1-RELATED 192 668 IPR045133 GO:0004521|GO:0004674|GO:0030968
Pumo8g01629 671 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 539 671 - -
Pumo8g01629 671 Pfam Protein kinase domain 252 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01629 671 SMART PGNneu 600 654 - -
Pumo8g01629 671 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 242 322 - -
Pumo8g01629 671 SUPERFAMILY Protein kinase-like (PK-like) 241 548 IPR011009 -
Pumo8g01629 671 MobiDBLite consensus disorder prediction 194 209 - -
Pumo8g01629 671 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 359 537 - -
Pumo8g01629 671 ProSiteProfiles Protein kinase domain profile. 250 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01629 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 397 409 IPR008271 GO:0004672|GO:0006468
Pumo8g01629 671 Pfam Ribonuclease 2-5A 541 667 IPR010513 GO:0004540|GO:0006397
Pumo8g01629 671 Gene3D Transferase(Phosphotransferase) domain 1 355 537 - -
Pumo8g01629 671 CDD RNase_Ire1 539 667 - -
Pumo8g01629 671 MobiDBLite consensus disorder prediction 180 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01629 Pumo-Chr8 51655017 51661079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01629 276 534 MAP Kinase Kinase Kinase AT3G06030 26.996 1.01e-20 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Pumo8g01629 Pkinase 1.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01629 K08852 - gmx:102661527 1119.76