Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01622 ATGGCGTCACGCGCTAGGGTCGCTGTCTACAAGGTTTGCTGGGAAAATTCTTGTGCCGTTTCTGATGTATTGGCTGCAATGGACACAGCCATCTCTGACAACGTCAATGTCCTTTCAATATCACTTGGAGGTGGACCAAATAGTTACGATGAAGATAACGTTGCAATTGGAGCCTTTGCAGCAATGGAGAAAGGGATTGTAGTTTCTTGCTCTGCAGGAAATGACGGTCCTAATCCCTCATCTCTCGGCTCCAATGTAGCACCTTGGTTGATCACTGTAGGGGCTGGCACACTCGATCGTGATTTCCCAGGGTACGTTAGCCTTAGGAATGGACAAAATTATTCTGGAGTGTCATTTTATAGTGGCAATTCTTTGCCTAATTCTCTCCTTCCAATCATATACGCGGGGAACGCAAGCTTAAATCTAAATCCATTAGCAAATCGGTGTATACCTGGAACCTTGGATCCAGAAAAGGTTAAAGGGAAAATTGTGTTGTGTGAACTTGGAGTTGTTCCTATGATAGACAAAGGATTTGCAGTGAAATCCGCTGGCGGGGTAGGCATGGTGTTGGGAACCGTGGAAGATGATGCGGAGGAACAAGCATCACAACCCCATATTTTGCCAACAACTATAGTGGGTATTAAAGCTACAAAAGCCATAAAAAAGTACCTGTCATCTGATCCAAAACCAATGGCTACGATTGTGTCTCAGGGAACGAAGGTTGGAATTGAGCCGTCGCCGGTTGTTGCAGAGTTTAGCTCTCGGGGTCCAAATCCAATTACGCCACAGATAATGAAACCAGATTTAATTGCGCCAGGTGTCCACATTTTAGCTGCATGGACAAGGCTTGAGGGTCCCACTGATTACGTCCAAGATGATAGGCACGTGGACTTCAACATCATCTCGGGCACATCCATGTCATGCCCTCACGTGACTGGGATAGCGGCTTTGATCAAGTCAGTTTATCCAAATTGGAGCCCAGCCGCAATTCGATCTGCACTAATGACCACAGCTTATTCGACTTACACCAATGGTCAAAAATTGCTAGATAGTGCCACAAACAAATCGTCAACGCCATTTGATATTGGCGCCGGACATGTGAACCCTGTTGCTGCGCTTAATCCAGGACTTGTTTATGATTTGACGGCGGATGATTATCTCAACTTCCTTTGTGCATTAAACTACACACCCAAAAGGATCGAGACCGTGGCGAGGAGAAAGTACAAGTGCGATGCACACAAACACTACAATGTAGCCGACCTAAATTACCCTTCATTTAGTGTGGTGTATAACACAACAATGGGTGCCAACAATGCAACGGTTGTTAAACACACTCGGACTCTTACTAATGTCGGGGCTGCAGGAACCTACAAGGTATCGGTTACGTTGGATATTCCATCTGTCAAAATCACAGTTGAGCCGGACATGTTGAGCTTCGACCAAAATGAGAACAAGTCATATACAGTGACATTTACAGCATCAGGTCCACCACCGTCGAGTGGTTTTGGTTTTGGACGTTTAGAATGGTCAAATGGAAAGAACGTTGTTGGAAGTCCTATCTCAATATATATTGAGCCTCCGAGCGTCACTGAAAACTCTAAAAAAAGTTGCTAA 1614 0.4517 MASRARVAVYKVCWENSCAVSDVLAAMDTAISDNVNVLSISLGGGPNSYDEDNVAIGAFAAMEKGIVVSCSAGNDGPNPSSLGSNVAPWLITVGAGTLDRDFPGYVSLRNGQNYSGVSFYSGNSLPNSLLPIIYAGNASLNLNPLANRCIPGTLDPEKVKGKIVLCELGVVPMIDKGFAVKSAGGVGMVLGTVEDDAEEQASQPHILPTTIVGIKATKAIKKYLSSDPKPMATIVSQGTKVGIEPSPVVAEFSSRGPNPITPQIMKPDLIAPGVHILAAWTRLEGPTDYVQDDRHVDFNIISGTSMSCPHVTGIAALIKSVYPNWSPAAIRSALMTTAYSTYTNGQKLLDSATNKSSTPFDIGAGHVNPVAALNPGLVYDLTADDYLNFLCALNYTPKRIETVARRKYKCDAHKHYNVADLNYPSFSVVYNTTMGANNATVVKHTRTLTNVGAAGTYKVSVTLDIPSVKITVEPDMLSFDQNENKSYTVTFTASGPPPSSGFGFGRLEWSNGKNVVGSPISIYIEPPSVTENSKKSC 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01622 537 ProSitePatterns Serine proteases, subtilase family, serine active site. 303 313 IPR023828 -
Pumo8g01622 537 Gene3D - 99 242 - -
Pumo8g01622 537 Pfam Subtilase family 2 346 IPR000209 GO:0006508|GO:0008236
Pumo8g01622 537 SUPERFAMILY Subtilisin-like 1 377 IPR036852 GO:0004252|GO:0006508
Pumo8g01622 537 Gene3D Peptidase S8/S53 domain 1 386 IPR036852 GO:0004252|GO:0006508
Pumo8g01622 537 Pfam Fibronectin type-III domain 420 522 IPR041469 -
Pumo8g01622 537 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 521 IPR045051 -
Pumo8g01622 537 Gene3D - 390 524 - -
Pumo8g01622 537 FunFam subtilisin-like protease SBT1.5 99 241 - -
Pumo8g01622 537 ProSiteProfiles Serine proteases, subtilase domain profile. 1 373 - -
Pumo8g01622 537 CDD PA_subtilisin_like 105 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01622 Pumo-Chr8 51554441 51556054 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01622 1 522 Subtilisin-like Serine Gene Family AT5G67360 62.715 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01622 - - gmx:100783771 859.751