Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01607 ATGGAGTTTGAGCCTTTGAGTCTAAGCAACGAGGTTATTGAATTTGATATGATTGGTTTGGGGGATGATGCTGCCATTGACATGGAGCACCCTGTTGAAGATGATGAGGACCTTGTGAATATTGATAATAGTCCTGCTGCTGCTGGTGTGGGACCTCACATTTCTGGAGGGGACACTAATCTTGAACCTTGTCAAGGTATGGAATTTGAATCCGAAGAGGCTGCGAAGGCCTTTTATAATTCCTATGCTCGCCGTGTTGGCTTTAGTACGCGGGTGAGCATGTCTCGACGCTCCAGGCGTGATGGTTCTATAATTCAGAGGTCTTTTGTGTGTGCCAAGGAAGGTTTTCGTGTGGAGAAGGAGAAGCATTTGGTTGATGGCAGAGTCAAGCGGCCTCGTGCTGAAACCCGTGTTGGTTGCAAGGCCATGTTGGTTGTGAAAATTCAAGATTCTGGCAGATGGGTTGTTTCTTCTTTTCTCAAGGAACATAACCATGAATTGGTTCCTCCTGACAAGGTGCATTGCCTTCGTTCTCACCGCCATGTTTCAGGTCCAGCTAAGTCGTTGATTGATACTTTGCAGGGTGCCGGAATTGGGCCTAGCGGAATAATGTCTGCACTAATCAAAGAATATGGTGGAATTAGCAATATCGGTTTCACTGAGCGTGATTGTAGAAATTATATGAGAAGCAGTAAGCAAAGGACCCTTGGAGGTGACACTCAAATCCTTTTGGATTACTTGAAGAGCAAACAAGCAGAGAATCCTTCATTTTTCTATGCTGTACAAGGTGATGAAGATCATTGCATGAGTAATATCTTCTGGGTTGATCCCAAGGCCAGGACTAACTATACTTACTTTGGTGACACTGTCACCTTTGACACAACATATAGGTCAAACCGCTATAGATTGCCTTTTTCACCTTTCACTGGTGTAAATCATCATGGACAGCCTGTATTATTTGGTTGTGCTCTCCTGATAAATGAATCTGAGGCATCTTTTGTCTGGCTGTTCAAAACCTGGCTCGAAGCAATGTTAGGTCGACCTCCAGTTTCAATTACTACTGATCATGATAGGGTGATTCGTGCAGCCATCAACCATGTCTTTCCTGGTACCCGTCACCGATTTTGTAAGTGGCACATTTTTAAAGAGTGTCAAGAGAAGTTGTCTCATGTGCTTTCTGAACATCATAATTTTGAAGCTGGCCTTCATAAATGTGTTAACCTGGCAGAGTCCATTGAGGAGTTTGAGTCTTGTTGGTCCTCTCTAATTGATAGGCATGATCTCAAAGAACTTGAATGGCTCCGAGCAATTTATGGTGATAGACGGCAGTGGGTACCAGTGTACTTGAGGGACACTTTTTTTGCAGAAATGTCAATAACACAGCGAAGTGATAGCATAAACTCTTATTTTGATGGATATATCAATGCATCAACAACACTTCAGCTTTTTGTCAAGCAGTATGAGAAGGCTATGGAGAGCCGTTATGAAAAAGAAGTCAAAGCTGATTATGACACAATTAACACTACTCCAGTTCTGAAGACTCCATCACCTATGGAGAAACAGACAGCAGGAGTTTACACAAGGAGATTGTTTATCAAATTTCAAGAAGAGTTGGTTGAGACATTAACATTCTTGGCAAACAAAGTAGATGAAGAAGAAATGATTACTGTGTATAGAGTAGCCAAATATGGGGAAATTCACAGGGCCTACTTTGTCAGATTTAACTCTTTTGAGCTGAAAGCTACTTGTAGCTGCCAGATGTTTGAGTTTTCTGGTCTAGTTTGTAGACATATATTGACTGTTTTTAGGGTGACAAATCTTCTTACTTTACCATCTCATTATATTTTAAAAAGATGGAGCAGGATTGCTAAAAGTGGTGTCACATTGGATGAACGTACTGCTAATTTGTCAAATGGTGCCCAAGAATCTCTAACTATCCGATACAATAATCTTCGTCATGAGGCCTTTAAGTATGTTGATGAGGGAGTAACCTCTCTGAAAGTTTATGATGTAGCAATGAGTGCTCTTCAAGAGGCTGCGAATAAAGTGGCACTTGCAACAAAAAATGGTGGAAGACAGGTTATTTTAAATGGAACTTGCGAAGAAGACCTTCATCAGAGCAATGAAGCAACTACAAGTCATAGTGATCTTCCATTTGGTTCACAACAATCTTCATATAAGGATGACCAAGATAGAACAATTGAGAAGTTGACACGGCAACTTGACCGAGCTCGAAGGAAGTGTGAAGTTTATAGGTCCAACTTGCTGTCGATTTTAAAAGATATTGAAGAGCAGAAGCTACAATTATCAGTTAAAGTCCAAAATATTAAGCTAGGAATGAAAGATTGA 2349 0.4108 MEFEPLSLSNEVIEFDMIGLGDDAAIDMEHPVEDDEDLVNIDNSPAAAGVGPHISGGDTNLEPCQGMEFESEEAAKAFYNSYARRVGFSTRVSMSRRSRRDGSIIQRSFVCAKEGFRVEKEKHLVDGRVKRPRAETRVGCKAMLVVKIQDSGRWVVSSFLKEHNHELVPPDKVHCLRSHRHVSGPAKSLIDTLQGAGIGPSGIMSALIKEYGGISNIGFTERDCRNYMRSSKQRTLGGDTQILLDYLKSKQAENPSFFYAVQGDEDHCMSNIFWVDPKARTNYTYFGDTVTFDTTYRSNRYRLPFSPFTGVNHHGQPVLFGCALLINESEASFVWLFKTWLEAMLGRPPVSITTDHDRVIRAAINHVFPGTRHRFCKWHIFKECQEKLSHVLSEHHNFEAGLHKCVNLAESIEEFESCWSSLIDRHDLKELEWLRAIYGDRRQWVPVYLRDTFFAEMSITQRSDSINSYFDGYINASTTLQLFVKQYEKAMESRYEKEVKADYDTINTTPVLKTPSPMEKQTAGVYTRRLFIKFQEELVETLTFLANKVDEEEMITVYRVAKYGEIHRAYFVRFNSFELKATCSCQMFEFSGLVCRHILTVFRVTNLLTLPSHYILKRWSRIAKSGVTLDERTANLSNGAQESLTIRYNNLRHEAFKYVDEGVTSLKVYDVAMSALQEAANKVALATKNGGRQVILNGTCEEDLHQSNEATTSHSDLPFGSQQSSYKDDQDRTIEKLTRQLDRARRKCEVYRSNLLSILKDIEEQKLQLSVKVQNIKLGMKD 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01607 782 Pfam MULE transposase domain 290 382 IPR018289 -
Pumo8g01607 782 ProSiteProfiles Zinc finger SWIM-type profile. 570 606 IPR007527 GO:0008270
Pumo8g01607 782 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 55 684 IPR031052 GO:0006355
Pumo8g01607 782 SMART 26again6 581 608 IPR006564 GO:0008270
Pumo8g01607 782 Pfam FAR1 DNA-binding domain 78 169 IPR004330 -
Pumo8g01607 782 MobiDBLite consensus disorder prediction 708 732 - -
Pumo8g01607 782 Coils Coil 727 754 - -
Pumo8g01607 782 MobiDBLite consensus disorder prediction 708 727 - -
Pumo8g01607 782 Pfam SWIM zinc finger 578 604 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01607 Pumo-Chr8 51361729 51366068 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pumo8g01607 MULE 5.1e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01607 - - gmx:100782414 1457.2