Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01602 ATGACCATTGATGTGCCACCATCCAGTGCCCAAAGTGTGAGGACAAATAGATCTTCCTTTAGTTCTAGCAATGGCCATGAGGCTACCCCAGTACACAACTATGCATCTGTTAGCAATGGTGATGGCTATGATAGTGATGGCTCCAATTTCGCGCCACCTACACCAACAACTCTATCAATGGCTATTCCATCAGAACTCGCTGGAGCTGTACCCTTGATCGATAAATTCCAGGTGGAAGGATTCTTAAAATTGATGCATAAACAAATTCAATCTGCTGGAAAACGTGGATTTTTTTCTAAAAGATCTGTGGGCCCTCAAGTTCGAGAGAAATTTACATTTGAGGACATGCTTTGTTTCCAAAAGGATCCAATACCTACATCATTGCTTAAGCTGAATGGTGACTTGGCAAGCCGAGCAACAAAATTATTTCAAATAATTTTGAAATATATTGGAGTTGATTCATCTGATCATGTAACTCCAATAAGCTTAGAAGAACGAGTTGAGCTTGTTGGTAAACTATACAAGCAAAGTTTGAAGCGTTCAGAACTCCGAGATGAACTTTTTGTCCAGTTATCAAAACAAACAAGAAACAACCCTGAGAGGGAATACTCAATTAAAGCATGGGAGCTAATGTATTTATGCGCTTCATCCATGCCTCCTAGCAAAGACATTGGAGCATATCTATCAGAATATGTTCATAATGTGGCATATGGTGTGACTGCTGATCCTGAGATCCGGGCCCTTGCATTAAATACATTAAATGCTTTGAAGCACTCTGTCAAGGCTGGTCCTAGACATATAATACCTGGGCCTGTCGAGATTGAAGCTCTGTTGACAGGGAAAAAGCTTACAACTATAGTGTTCTTCCTGGATGAAACATTTGAAGAAATTACATATGACATGTCAACAACAGTTGCCGATGCTGTCGAGGAACTTGCAGGGATCATTAAACTGTCAACATACTCGAGCTTTAGCTTGTTTGAATGTCGTAAAGTTGTTACCGGCTCCAAATCACCTGATTCTGGGAATGAGGAGTACATTGGGTTAGACGACAATAAATATATTGGGGATCTCCTGGCGGAATTTAAGGCAGTGAAGGATCGAAGTAAGGGAGAAATATTGCACTGTAAACTAATATTGAAGAAAAAATTATTTCGTGAATCAGATGAAGCTGTGACAGATCCAATGTTTTTGCAGTTGTCCTATGTACAATTGCAGCATGATTATATTTTGGGTAATTACCCTATTGGAAGGGATGATGCAGCCCAGCTTTCTGCATTGCAAATCTTGGCTGAGATTGGATTTGTTAGAAGACCTGAATCATGCACTGACTGGAATTCATTTCTGGAGCGATTTCTTCCTAGACAAATAGCAATGACTCGAGCAAGACGGGAATGGGAGTTGGACATTCTTTCTTGTTATCATTCACTGGTATGGGCGCATGTGACAAAAGATGATGCAAGACAGCAATTTCTGCATATATTGAGAACACTTCCCTATGGGTTTTCCGTTTTCTTCAATGTTCGCAAAATTGATGATCCTATTGGACTATTGCCTGGACGAATAATATTGGGAATCAACAAGAGAGGGGTCCATTTTTTCCGTCCCGTTCCAAAGGAATATATGCACTCTGCTGAGTTGAGAGACATAATGCAATTTGGAAGCAGCAATACTGCAGTATTTTTTAAAATGCGAGTTGCAGGTGTTCTTCACATATTCCAGTTTGAAACAAAGCAGGGAGAAGAAATTTGTGTCGCTCTTCAGACACACATAAATGATGTAATGCTGCGCCGCTATTCCAAAGCTCGATCTGCTGCGGGTGGTTCTTTGAATGAAGACATTTCTAATAATATTAAGCCGTCTAATTTGGAACTATATGAAAAACGTGTTCAAGAATTATCAAAACTTGTTGAAGAGTCTCAAAGGAATGCTGATCAATTGCTGGAAAAATTGCGTGAGAAGCAAAAACAAGAAGAGGACATGCTACAAGAATTAGAGGGCTTAAAAAAATCTTTAAAAGCTGATAAGCAGAGTCTTGCAGAAGTTACAAATGACCGTGACAAGCTTAGGTCATTATGTGATGAAAAAGATAAGGCACTTCAGGCTAAAATTCTAGAGAAAAGAAACATGGAAGCAAAGATGGCCGAGTTGAGTAATCTGGTTACAGAGAACACTACCAAAAAGGACCCCATTCAAGCAAATAACCAAGTGTCACAAAAACTCGAAGATGACCTAAAACTATGTAAAGGTGAACTGCGTGTAGCTGAAGAGACTATTAAAAGCTTGAGAAGTGATAAGTTGATTTTGGAACAGAAGCTATCTGAACTTGAGAAGAAGAGTGCTGAAGAGGTTAGTTCTCTTCAATGGAAACTTGAGCAAGAACGCAAAACTCAGAACTCTAAAGTATATGACCTTGAACGAAAATTGGATGTGTTTAGACAAGAATTAACTATGGCTGAGTCTACACTCTCGGTCAAGGACTCTGAATTGGCTGCATTGAAGAACAATTTAGATGAACTAGAAGAATTGAGAGAAATGAAAGAGGACATTGATAGAAAGAATGAGCAAACAGCTGCCATACTGAAGATGCAAGCAGCTCAACTAGCTGAAATGGAATTGCTTTATAAGGAAGAGCAGGTTCTCAGAAAGCGATATTTTAATACCATAGAAGATATGAAAGGCAAGATAAGAGTTTATTGTCGGTCAAGACCTCTTAGTGAAAAAGAGATTGCAAGCAAAGAAAAGGATTCTCTTACTACTGTAGATGAGTTTACAGTTGAGCATCCATGGAAAGATGATAAACCGAAACAGCACATGTATGACCGTGTGTTTGATGGTGATGCCACTCAAGAAGATGTATTTGAGGATACAAGGTACTTAGTGCAATCTGCTGTAGATGGTTATAATGTTTGCATATTTGCTTATGGTCAAACTGGTTCTGGAAAGACTTTTACAATCTATGGAGCTGAAAACAACCCTGGGCTTACCCCTCGTGCTACTGCAGAACTTTTTAGAATTTTAAGGAGAGATAGTAACAAGTATTCTTTTTCGTTGAAGGCATATATGTTGGAATTATATCAAGATACACTTGTAGATCTTCTGTTACCTAAGAATGCAAAGCGTTTTAAATTGGATATTAAGAAGGATTCCAAGGGAATGGTAGCAGTAGAAAACGTAACAATTGTGCCGATTTCTACTGTGGAGGAATTAAATAGCATAATACAGAGGGGTTCTGAGCAGCGACATACATCAGGGACACAAATGAATGACGAAAGCTCAAGATCTCATCTCATACTATCAATTGTTATTGAAAGTACGAACCTTCAAAGCCAATCAACTGCAAGGGGAAAGTTAAGTTTTGTGGATCTTGCTGGCTCAGAAAGAGTAAAAAAGTCAGGCTCTGCAGGTAGTCAACTTAAAGAAGCTCAAAGTATCAACAAATCATTATCAGCACTAGGAGATGTTATTAGTGCTTTGTCTTCTGGTGGTCAACACATACCTTACAGAAATCACAAGTTAACTATGCTGATGAGTGATTCACTTGGGGGCAATGCCAAAACCCTCATGTATGCATCACGAGTGAGATCAATTGTGAATGATCCAAGCAAAAATGTTTCTTCTAAAGAGATAGCTCGACTGAAGAAATTGGTTGCATATTGGAAGGAGCAAGCAGGTAGGAGAGGAGAGGATGAAGATTTGGAAGAAATCAAAGAGGAAAGACCAACTAAAGAGAGGACTGATGGCCGGCATTCTATGTAG 3759 0.3916 MTIDVPPSSAQSVRTNRSSFSSSNGHEATPVHNYASVSNGDGYDSDGSNFAPPTPTTLSMAIPSELAGAVPLIDKFQVEGFLKLMHKQIQSAGKRGFFSKRSVGPQVREKFTFEDMLCFQKDPIPTSLLKLNGDLASRATKLFQIILKYIGVDSSDHVTPISLEERVELVGKLYKQSLKRSELRDELFVQLSKQTRNNPEREYSIKAWELMYLCASSMPPSKDIGAYLSEYVHNVAYGVTADPEIRALALNTLNALKHSVKAGPRHIIPGPVEIEALLTGKKLTTIVFFLDETFEEITYDMSTTVADAVEELAGIIKLSTYSSFSLFECRKVVTGSKSPDSGNEEYIGLDDNKYIGDLLAEFKAVKDRSKGEILHCKLILKKKLFRESDEAVTDPMFLQLSYVQLQHDYILGNYPIGRDDAAQLSALQILAEIGFVRRPESCTDWNSFLERFLPRQIAMTRARREWELDILSCYHSLVWAHVTKDDARQQFLHILRTLPYGFSVFFNVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYMHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAAGGSLNEDISNNIKPSNLELYEKRVQELSKLVEESQRNADQLLEKLREKQKQEEDMLQELEGLKKSLKADKQSLAEVTNDRDKLRSLCDEKDKALQAKILEKRNMEAKMAELSNLVTENTTKKDPIQANNQVSQKLEDDLKLCKGELRVAEETIKSLRSDKLILEQKLSELEKKSAEEVSSLQWKLEQERKTQNSKVYDLERKLDVFRQELTMAESTLSVKDSELAALKNNLDELEELREMKEDIDRKNEQTAAILKMQAAQLAEMELLYKEEQVLRKRYFNTIEDMKGKIRVYCRSRPLSEKEIASKEKDSLTTVDEFTVEHPWKDDKPKQHMYDRVFDGDATQEDVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGAENNPGLTPRATAELFRILRRDSNKYSFSLKAYMLELYQDTLVDLLLPKNAKRFKLDIKKDSKGMVAVENVTIVPISTVEELNSIIQRGSEQRHTSGTQMNDESSRSHLILSIVIESTNLQSQSTARGKLSFVDLAGSERVKKSGSAGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKEQAGRRGEDEDLEEIKEERPTKERTDGRHSM 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01602 1252 ProSiteProfiles MyTH4 domain profile. 119 278 IPR000857 GO:0005856
Pumo8g01602 1252 PANTHER MYOSIN VII, XV 6 901 - -
Pumo8g01602 1252 Coils Coil 700 720 - -
Pumo8g01602 1252 Gene3D MyTH4 domain 98 279 IPR038185 -
Pumo8g01602 1252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 895 1225 IPR027417 -
Pumo8g01602 1252 FunFam Kinesin-like calmodulin binding protein 386 499 - -
Pumo8g01602 1252 SUPERFAMILY Second domain of FERM 381 500 IPR035963 -
Pumo8g01602 1252 CDD FERM_C_KCBP 503 608 - -
Pumo8g01602 1252 Gene3D Kinesin motor domain 882 1199 IPR036961 -
Pumo8g01602 1252 Gene3D - 395 498 IPR014352 -
Pumo8g01602 1252 Pfam Kinesin motor domain 901 1191 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo8g01602 1252 Coils Coil 823 860 - -
Pumo8g01602 1252 Gene3D - 1200 1248 - -
Pumo8g01602 1252 ProSiteProfiles Kinesin motor domain profile. 895 1217 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo8g01602 1252 MobiDBLite consensus disorder prediction 1 38 - -
Pumo8g01602 1252 Gene3D - 503 610 IPR011993 -
Pumo8g01602 1252 MobiDBLite consensus disorder prediction 1223 1252 - -
Pumo8g01602 1252 SMART B41_5 279 505 IPR019749 -
Pumo8g01602 1252 Coils Coil 623 685 - -
Pumo8g01602 1252 ProSitePatterns Kinesin motor domain signature. 1116 1127 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pumo8g01602 1252 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 98 280 - -
Pumo8g01602 1252 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 282 385 - -
Pumo8g01602 1252 FunFam Kinesin-like calmodulin-binding protein 839 1216 - -
Pumo8g01602 1252 Pfam FERM central domain 389 505 IPR019748 -
Pumo8g01602 1252 CDD KISc_C_terminal 893 1199 - -
Pumo8g01602 1252 Pfam MyTH4 domain 172 276 IPR000857 GO:0005856
Pumo8g01602 1252 ProSiteProfiles FERM domain profile. 283 599 IPR000299 GO:0005856
Pumo8g01602 1252 CDD FERM_B-lobe 398 498 IPR019748 -
Pumo8g01602 1252 SMART MyTH4_1 119 278 IPR000857 GO:0005856
Pumo8g01602 1252 SUPERFAMILY PH domain-like 505 593 - -
Pumo8g01602 1252 Coils Coil 738 779 - -
Pumo8g01602 1252 SMART kinesin_4 893 1205 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo8g01602 1252 PRINTS Kinesin heavy chain signature 1086 1103 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo8g01602 1252 PRINTS Kinesin heavy chain signature 967 988 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo8g01602 1252 PRINTS Kinesin heavy chain signature 1166 1187 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo8g01602 1252 PRINTS Kinesin heavy chain signature 1117 1135 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo8g01602 1252 Gene3D - 282 386 - -
Pumo8g01602 1252 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 503 612 - -
Pumo8g01602 1252 SUPERFAMILY Prismane protein-like 838 899 IPR011254 GO:0003824|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01602 Pumo-Chr8 51289356 51297872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01602 28 1247 Calmodulin-binding Proteins AT5G65930 71.920 0.0 1799
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01602 - - gmx:100785619 2261.49