Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01594 ATGGCAGAATCAGAATCAGAATCAATGGGGGCCGGGGATGAGAGATGGAAGGCCCATGTGGGAATGGCACTGGCCCAATTATTCTATGGTGGCTATACTGTAATCACTAAAGTGGCCCTCAATGTTGGGATCAACCAACTAGTTTTCTGCTTCTACCGGAATTTCCTTGCCTTCATCATTCTTGCTCCCCTCGCTTTTTTTATTGAAAGACGGACTAGACCACCCATTACCAAGAAGCTACTGATGTCATTCTTCTTTCTTGGATTGACAGGGATATTTGGCAACCAGCTCTTGTTTCTTATTGGTTTAAGTTATACCAATCCAACTTATGCTGCTGCTGTACAGCCAGCCGTTCCAGTTTTCACATTTCTGTTAACTGTAATGATGGGCATAGAAAGAGTGAACTTGCTCAGATATGAAGGTCTGGCAAAGGTTGGAGGAACTCTTATCTGTGTTTCTGGTGCCATGTTGATGGTTTTGTATCGTGGTCCCGCTATGATAGGAAATAAAGAAATGGACCATGTTCTACAAATTAAAATAAGTGCCAGAGGTCAGCCAGAGCCTTCTGGATGGTTAATCAATGGTTTACAGGATCTTGGATTTGACCATTTTCAGCTTGGGGTTATGTTCTTGATAGCAAACTGCTGTTGCATGACTGCTTTTCTAGCTATTCAGGCACCATTATTAAAAAAGTATCCTGCAAATCTATCTGTCACAGCGTATTCATTCTTCTTTGGAGTTGTACTGACGTTGATTGCATCATTGTTCATGGTTAATGAGTCAACTGACTGGATTTTGAAGCAATCAGAAATACTAGCCGTTGTATACGCTGGAAGTATTACATCTGCCCTTAACTATGGACTTGTTATATGGAGCAATAAGATCTTGGGGCCAGCTTTGGTTGCCCTTTACTATCCGCTTCAACCTGCGTTTTCTGCCCTCCTGTCCCAAATTTTCCTTGGCACTCCAATTTATTTGGGAAGCATCCTAGGGGGATCTTTTATCGTTGCTGGTCTATATATAGTTACTTGGGCATCTTACAGAGAAAGACAAGCAACTATTGGAGTTACTCCTCATGGCTCTTCGGTCTCTGAACCACTTATTCAAGAAAAAAGTGCATACCAGAGTGGTCACATTTTTTCGGGGTCCTCCAGCGTATCCTCAAATCCAAACTCATCAAATTAA 1185 0.4211 MAESESESMGAGDERWKAHVGMALAQLFYGGYTVITKVALNVGINQLVFCFYRNFLAFIILAPLAFFIERRTRPPITKKLLMSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAVQPAVPVFTFLLTVMMGIERVNLLRYEGLAKVGGTLICVSGAMLMVLYRGPAMIGNKEMDHVLQIKISARGQPEPSGWLINGLQDLGFDHFQLGVMFLIANCCCMTAFLAIQAPLLKKYPANLSVTAYSFFFGVVLTLIASLFMVNESTDWILKQSEILAVVYAGSITSALNYGLVIWSNKILGPALVALYYPLQPAFSALLSQIFLGTPIYLGSILGGSFIVAGLYIVTWASYRERQATIGVTPHGSSVSEPLIQEKSAYQSGHIFSGSSSVSSNPNSSN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01594 394 PANTHER WAT1-RELATED PROTEIN 20 350 IPR030184 GO:0016020|GO:0022857
Pumo8g01594 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 348 - -
Pumo8g01594 394 Pfam EamA-like transporter family 20 143 IPR000620 GO:0016020
Pumo8g01594 394 Pfam EamA-like transporter family 206 343 IPR000620 GO:0016020
Pumo8g01594 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01594 Pumo-Chr8 51200673 51214327 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01594 101 368 Nodulin-like Gene Family AT5G45370 61.029 9.59e-117 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01594 - - gmx:100793192 660.603