Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01592 ATGGTGATTGCATCATCATTCATGGTTAACGAGTTGACTGACTGGATTTTGACACAATCAGAAATACTAGCCGTTGTATATGCTGGAACTATTGCATCTGCCCTTAACTATGGAATCGTTACATGGAGCAATAAGATCTTGGGGCCAGCTTTGGTTGCCCTTTACAATCCACTTCAACCTGCATTTTCTGCCTTCCTGTCCCAAATTTTCCTTGGCACTCCAATTTACTTGGGAAGCATCTTAGGGGGATCTTTTATCATTGCCGGTCTATATATAGTTACCTGGGCATCTTATAGAGAAAGACGGGAAACTTTTGGAGTTACTCCTAATGGCTCTTGGGTCTCTGAACCACTTATTCATGAAAAAACTGCATACCAGATTTCGGGGTCCTCCAGCGTGTCCTCAAACCCCAAGTCATCAGATTAA 426 0.4272 MVIASSFMVNELTDWILTQSEILAVVYAGTIASALNYGIVTWSNKILGPALVALYNPLQPAFSAFLSQIFLGTPIYLGSILGGSFIIAGLYIVTWASYRERRETFGVTPNGSWVSEPLIHEKTAYQISGSSSVSSNPKSSD 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01592 141 PANTHER WAT1-RELATED PROTEIN 3 101 IPR030184 GO:0016020|GO:0022857
Pumo8g01592 141 Pfam EamA-like transporter family 16 94 IPR000620 GO:0016020
Pumo8g01592 141 SUPERFAMILY Multidrug resistance efflux transporter EmrE 14 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01592 Pumo-Chr8 51197143 51199262 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01592 1 122 Nodulin-like Gene Family AT5G45370 61.111 1.09e-47 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01592 - - gmx:100793730 236.498