Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01588 ATGCCACAGAACTGCATAGCACCAAAGCCAGAATACTGCAATAGTCATCACTCTGTGGAAGGACCCCCAGAGATGACTGAGCCCCATAACTCAACTGTTCTTTCCTTTCCCATGCAAACCAATGAACAACAACAACAACAACCTTTCCCAAAACTCATTATGTACCCCATAACTCTGAAGTTTGAGGAGTTGGTGTACAAAGTTAAACTAGAGCAGAAAGGAGGGTGCTGGGGAAGTACATGGACTTGCAAGGAGAAGACCATATTGAATGGAATCACTGGTGTGGTGTGTCCAGGAGAAATACTAGCCATGTTGGGGCCATCAGGCAGTGGCAAAACCACACTTCTCACAGCACTTGGAGGCCGGCTCAGCGGCAAACTATCCAGTAAGATCACGTACAACGGCCAACCTTTCTCCGGTGCCATGAAAAGAAGGACAGGTTTTGTAGCTCAGGATGATGTGCTATACCCTCACCTAACTGTCACTGAAACTCTAGTGTTCACTGCACTTCTAAGGCTTCCCAACAGCTTGACCCGAGACGAAAAAGTTCAGCATGTAGAGAGAGTGATCACTGAGCTAGGACTGACTCGTTGCAGGAGCAGCATGATAGGAGGTCCACTTTTTAGAGGAATATCAGGTGGAGAGAAAAAGAGAGTGAGCATAGGCCAAGAAATGCTCATCAACCCAAGCCTCCTGTTGCTGGATGAGCCTACTTCAGGTTTGGATTCCACCACAGCACAAAGGATCCTCAACACAATCAAACGCCTAGCTAGTGGGGGTAGAACTGTTGTCACCACTATTCACCAACCCTCTAGTAGGCTCTACTATATGTTTGATAAGGTGATCTTGCTCTCTGAAGGCTGCCCCATCTACTATGGTCCTGCTTCAACTGCCTTGGACTACTTCTCATCTGTTGGCTTTTCCACATGTGTGACTGTCAATCCAGCTGATCTCTTGCTTGATCTTGCCAACGGGATTGCCCCGGACTCCAAGCATGCAACTGAACAAAGTGAGGGACTGGAACAGGAGAGGAAGCAGGTGAGAGAATCTCTCATCTCTGCTTATGAGAAGAATATAGCTACAAGGCTGAAAGCTGAGGTTTGCAGCCTGGAAGTGAACAACTACAATATCACAAAAGATGCTTGTGCAAGAAATTCGATAAAGCCAGAACAATGGAGCACGAGCTGGTGGCATCAGTTCAAAGTACTATTACAAAGGGGAGTGAAGGAGCGAAGGTATGAAGCCTTCAATAGGCTGAGAATATTCCAAGTTGTAAGTGTCGCTTTTCTTGGTGGACTATTGTGGTGGCATACTCCAGAGTCACACATTGAAGATCGGGTTGCCTTGCTCTTTTTCTTTTCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCAGTTTTCACATTCCCTCAAGAGAGGAGAATGCTGATCAAGGAACGGTCGTCGGGAATGTACCGCCTTTCTTCCTACTTTCTAGCTAGAACAATAGGAGACTTGCCACTGGAACTTGCACTTCCAACTGCATTTGTTTTCATAATCTATTGGATGGGAGGGCTTAAACCTGATCCTGTGACTTTTATCCTTTCACTTCTTGTGGTTCTTTACAGTGTTGTTGTCTCTCAAAGCCTTGGCTTAGCATTTGGTGCTATTTTGATGGAGATTAAACAGGCAACTACTCTAGCTTCTGTGACAACCCTTGTGTTTCTCATTGCTGGAGGGTACTATATACAACAGATTCCTCCATTCATAGTGTGGCTCAAGTACTTGAGCTACAGCTACTACTGTTACAAGCTGCTTTTAGGTGTCCAGTACAATGAAAATGACTATTATGAGTGCTCAAAGGATGAGCTGTGCAAGGTTGCAGACTTTCCTCCTATCAAATCAATGGGCTTGAATCATTTGTGGGTTGATGTGTGCATTATGGCCCTGATGTTGGTGGGTTATCGACTAGTTGCTTATTTAGCACTGCATAGAGTTAGGTAG 1983 0.4544 MPQNCIAPKPEYCNSHHSVEGPPEMTEPHNSTVLSFPMQTNEQQQQQPFPKLIMYPITLKFEELVYKVKLEQKGGCWGSTWTCKEKTILNGITGVVCPGEILAMLGPSGSGKTTLLTALGGRLSGKLSSKITYNGQPFSGAMKRRTGFVAQDDVLYPHLTVTETLVFTALLRLPNSLTRDEKVQHVERVITELGLTRCRSSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKRLASGGRTVVTTIHQPSSRLYYMFDKVILLSEGCPIYYGPASTALDYFSSVGFSTCVTVNPADLLLDLANGIAPDSKHATEQSEGLEQERKQVRESLISAYEKNIATRLKAEVCSLEVNNYNITKDACARNSIKPEQWSTSWWHQFKVLLQRGVKERRYEAFNRLRIFQVVSVAFLGGLLWWHTPESHIEDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPDPVTFILSLLVVLYSVVVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYIQQIPPFIVWLKYLSYSYYCYKLLLGVQYNENDYYECSKDELCKVADFPPIKSMGLNHLWVDVCIMALMLVGYRLVAYLALHRVR 660
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01588 660 CDD ABCG_EPDR 56 293 - -
Pumo8g01588 660 ProSitePatterns ABC transporters family signature. 211 225 IPR017871 GO:0005524|GO:0016887
Pumo8g01588 660 Coils Coil 330 350 - -
Pumo8g01588 660 Gene3D - 78 305 IPR027417 -
Pumo8g01588 660 Pfam ABC-2 type transporter 268 346 IPR043926 GO:0140359
Pumo8g01588 660 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 59 311 IPR003439 GO:0005524
Pumo8g01588 660 FunFam ABC transporter G family member 22 76 305 - -
Pumo8g01588 660 Pfam ABC-2 type transporter 399 604 IPR013525 GO:0016020|GO:0140359
Pumo8g01588 660 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 303 IPR027417 -
Pumo8g01588 660 Pfam ABC transporter 90 239 IPR003439 GO:0005524
Pumo8g01588 660 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 31 653 - -
Pumo8g01588 660 SMART AAA_5 98 288 IPR003593 GO:0016887
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pumo8g01588 Pumo-Chr8 51139425 51142947 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01588 88 287 Calmodulin-binding Proteins AT2G36910 29.858 1.85e-12 68.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01588 K05681 - gmx:100780191 1266.52