Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01562 ATGGCTTCCAATTCCAACAGTACTCGTGATGCAATCTCCGTAAGGCACAGTGAACCGCAACTGGTGGTGCCAGCAAAACCAACTCCAAGTGAAGTAAAGCCTCTTTCAGACATAGACGACCAAGAAGGGCTTCGCATGCAGCTCTCATTCATTATGTTCTACAAATGCAACCCCACAATGAAGGAATTTGACCCTGCCAAGGTCATCAAGAGAGGCATCTCTGAGGCACTGGTTCACTACTATCCCTTGGCTGGGAGGGTCACAGAAGGGCCTAATAGAAAGCTCATGGTAGAGTGCAGTGGACAAGGGGTTCTGTTTGTTGAAGCTGAGGCTGACGTTGCTTTGGACCAGCTTGGTGACTCAATTGGACCACCTTGTCCACATAGGAAACAATTCTTATATGAAGTGCCTGCTTCTGATGGAATTCTTGGCTGCCCTTTGTTGTTGATTCAGGTAACTCGTCTCTCCTGCGGAGGATTCGTAGTTGGTGTACGCATGAATCACGTTGTGTGCGACTCTTTCGGACTGGTCCAGTTCCTTAACATGGTCGGAACGGTGGCAAGGGACCCACACGCAGCAATTCAACCACCGGTGTGGAAAAGAGAGTTATTTAGCGCACGTGATCCTCCACGCGTCACATGCATACACCACGAGTACGATGATGTCGTCCATCATCATAGTACTACTACTTCACATTCAATGGAAAATATTATGTCCCACGAATCATTTTTCTTTGGGCCCAAAGAGATTTTCATGCTCCGTAAGCGTCTTCCTCTCAATATTAAAAAATGCTCAACTTTCGAGTTGCTATCCGCGTGCTTGTGGAAATGTCGCACAATGGCACTTGAACTGAACCCTAACGAGGTTGTTGGTGTGTCTTGTTTCATCACTGCTCACGGTAAGGTCAAAGTGCCTAAAGGGTATTATGGGAATGCGCTTGTGTTTCCAATTGCACTATCAAAGGCTGGTTTGTTGTGCCAAAACTCGTTGGGGTATGCTTTGGGTTTGATTAGAGAAGCAAAGGCTCGAATGAGTGAAGAATACGTGAGGTCAGTGGTTGATCTTATGGTTCTCAAGGGGCGTCCAATGTATAGGACAAGTGGGAACTTCTTTGTGGGTGATATGACTCGTGTGGGTTTTGGTGAAATTGATTTTGGTTGGGGAAAGCCCGTTTATGGAGGCCCCGTTGGAGCCATACCATTTATTAGCTACCTTGCTCGCTTCACAAATGGAAGAGGCAAGGATGGGATTATGGTGCCTATATTGTTGCCACATCTTGCCATGAAAAGGTTTCTTTGGGAGGTGACGAAAATGACTAGTGAAGAGGAGTTTCATCCTATTGCCAACACGAAAACAAGAGCTAGATCCATGATATAA 1377 0.4633 MASNSNSTRDAISVRHSEPQLVVPAKPTPSEVKPLSDIDDQEGLRMQLSFIMFYKCNPTMKEFDPAKVIKRGISEALVHYYPLAGRVTEGPNRKLMVECSGQGVLFVEAEADVALDQLGDSIGPPCPHRKQFLYEVPASDGILGCPLLLIQVTRLSCGGFVVGVRMNHVVCDSFGLVQFLNMVGTVARDPHAAIQPPVWKRELFSARDPPRVTCIHHEYDDVVHHHSTTTSHSMENIMSHESFFFGPKEIFMLRKRLPLNIKKCSTFELLSACLWKCRTMALELNPNEVVGVSCFITAHGKVKVPKGYYGNALVFPIALSKAGLLCQNSLGYALGLIREAKARMSEEYVRSVVDLMVLKGRPMYRTSGNFFVGDMTRVGFGEIDFGWGKPVYGGPVGAIPFISYLARFTNGRGKDGIMVPILLPHLAMKRFLWEVTKMTSEEEFHPIANTKTRARSMI 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01562 458 Gene3D - 8 219 IPR023213 -
Pumo8g01562 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 431 - -
Pumo8g01562 458 Pfam Transferase family 14 432 - -
Pumo8g01562 458 Gene3D - 220 432 IPR023213 -
Pumo8g01562 458 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01562 Pumo-Chr8 50743740 50747362 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01562 12 435 Monolignol Biosynthesis Gene Families AT5G48930 29.864 5.48e-49 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01562 - K19861 gmx:100817429 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01562 8 50743740 50747362 Pumo8g01562 8 50743740 50747362 ECH