Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01558 ATGGAGAATGTGAGAATAAGCCGGTGGTTGAACCTTCTGGTGTGTGCCCTGCTGTTGCTGATAGCAGAAGCTTCTTATGTGCCAATCACTATTGTTCAGAAAGCGGTAGCTAAAGGAGCTGTTTGTTTAGATGGGAGTCCACCAGCTTACCATTTTGATAAGGGATTTGGAGCAGGGATTAACAATTGGTTGGTTGCATTTGAGGGAGGAGGATGGTGCAACAATGTCACTACTTGCCTTGCTCGCAAGACCAATCGTTTAGGTTCATCTAAGCAAATGGCCAAGCAAATTGCCTTTTCAGGAATTTTGAGTAACAGGGCACTGTTTAATCCAGATTTCTACAACTGGAACAGAATCAAGGTTAGGTATTGTGATGGTTCCTCATTTACTGGTGATGTGGAAGCAGTGAACCCAGTAACTAAGTTGCACTTCAGAGGAGCAAGGATTTTCGCTGCTGTCATGGAGGATTTACTAGCAAAAGGAATGAAAAATGCTCGAAATGCTATTATCTCTGGATGTTCAGCTGGAGGATTAACTTCAGTACTGCATTGTGATCAATTCCGAGCTCTATTACCTAGAGGAGCTAGAGTGAAATGCCTCTCAGATGCTGGTTACTTTATCAATGCAAAGGATGTCTTGGGAGAACAACACATTGAACAGTACTTCAGTCAAGTTGTTGCCACACATGGCTCTGCGAGGAATTTGCCTCAATCATGCACTTCAAGACTTAGCCCAAGGCTGTGCTTTTTCCCACAATATTTGGTGTCACGTATCACTACACCAATCTTCTTTGTAAACGCGGCATACGACTCATGGCAGATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTCAAGGCCATTGGCATAGCTGCAAGCTTGATATAAACAATTGCTCACCTGATCAACTCGATCTAATGCAAGGCTTCAGGACAGAATTTTTAAGGGCTATAACTGTGCTAGGCAACTCTTCATCTAAAGGATTGTTCATTGACTCTTGCTATGCCCACTGCCAAACTGAAATGCAGGAGACATGGTTGAGAAGTGACTCTCCAGAGCTGAAAAAGACAACAATTGCAAAGGCTGTAGCAGACTGGTTTTATGAAAGAAGACCTTTCCATCAGATAGATTGCCCTTACCCTTGCAACCCCACTTGTCACAACCGCGTTTTCAATCCACAAGACGACCACCCAGGAAAAAATGTGACCACGAAAGGAACATCAGATGCATCATCAGCCACAAAGCTCAATTTTCCCAAACTAACAAACAAGGCACAATGGATTGACCTTGTGTGCATTAATCGTGGAATCAGTGGGTTTCTACTAGCGTTGGTTCTTCTGAACAAGATGGAATAA 1356 0.4344 MENVRISRWLNLLVCALLLLIAEASYVPITIVQKAVAKGAVCLDGSPPAYHFDKGFGAGINNWLVAFEGGGWCNNVTTCLARKTNRLGSSKQMAKQIAFSGILSNRALFNPDFYNWNRIKVRYCDGSSFTGDVEAVNPVTKLHFRGARIFAAVMEDLLAKGMKNARNAIISGCSAGGLTSVLHCDQFRALLPRGARVKCLSDAGYFINAKDVLGEQHIEQYFSQVVATHGSARNLPQSCTSRLSPRLCFFPQYLVSRITTPIFFVNAAYDSWQIKNILAPGVADPQGHWHSCKLDINNCSPDQLDLMQGFRTEFLRAITVLGNSSSKGLFIDSCYAHCQTEMQETWLRSDSPELKKTTIAKAVADWFYERRPFHQIDCPYPCNPTCHNRVFNPQDDHPGKNVTTKGTSDASSATKLNFPKLTNKAQWIDLVCINRGISGFLLALVLLNKME 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01558 451 SUPERFAMILY alpha/beta-Hydrolases 143 272 IPR029058 -
Pumo8g01558 451 PANTHER NOTUM-RELATED 14 388 IPR004963 GO:0016787
Pumo8g01558 451 Pfam Pectinacetylesterase 22 371 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01558 Pumo-Chr8 50631590 50637041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01558 5 398 Carbohydrate Esterase AT4G19420 61.072 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01558 K19882 - gmx:100818146 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01558 8 50631590 50637041 Pumo8g01558 8 50631590 50637041 ECH