Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01544 ATGTCCCCCCTCAGCCGATTCTTCTACAAGCGCCCCCCAGACGGCTTACTCGAATTCGCCGACAGAGTCTACGTCTTCGATTCCTGCTTCTCCACGGAGGCCCTCCCGGACGGAATGTACAGCCTCTACCTCCGCCAAATCCTGGCCGACCTCCACGATGACTTCCCGGAATCCTCCTTCGTCGCCCTCAACTTCCGCGATGGCGACCACCGCAGCAGCTTCTCCCGCGTCCTCTGCGACCTCGACGTCACCGTCGTCGACTACCCCAAGCAGTACGAGGGCTGCCCCCTCCTCCCCCTCTCCCTCGTCCACCACTTTCTCCGCCTCTGCGACTCCTGCCTCGCCGACCCCGCCGCCCTGATCATCTTCCACTGCGAGCGCGGCGGCTGGCCCCTCCTCGCCTTCCTCCTCGCCGCCTTCCTTGTCTTCCGAAAGGTGCAGAGTGGGGAGCGGAGAATTCTCGAGATGGTTCATAAGGAGGCTCCCAAAGGGTTGCTGCAGCTGCTGTCGGCTTTGAACCCTTTGCCTTCGCAGCTTCGGTATGTGCAGTATGTGGCGAGGAGGAACATTGGGGCGGAGTGGCCCCCACCGGAGAGGGCGCTGTCGCTGGACTGTGTTATTCTCAGAGGGGTTCCTGGGTTTGATGGGGGGAATGGGTGCAGGCCTTTGTTTAGGATTTTTGGGAGGAATTTGCTTAGTAAAGGGGGGCTTTCCACACATATGATTTATAATATGCATAAGAAGAAGAAGAGTTTGAGGCACTATAGACAGGCAGATTGTGATGTGATTAAGATTGATATTCAATGCTTAGTGCAAGGGGATGTGGTGTTGGAGTGTGTCCATTTGGATTTGGATCCAGAGAGGGAAGTTATGATGTTTCGGGTGATGTTCAACACGGCATTTATTCGGTCCAACATTTTGATGCTGAATGCTGAGAACTTGGACATTCTTTGGGATTCGAAGGAGCGGTATCCAAAGGGCTTCCGAACTGAGGTTTTGTTTGGGGAGGTTGAAAGCATAAGTCCTCCAAGGGCTCCGACAAGTATTTTAGATGGTGAGGTGAAAGGTGGATTGCCCATTGAGGCATTTTCAAGGGTTCAAGAACTTTTTAGTGGTGTAGAATGGGTTGAAAGTGGTGATGCAGCTGCTGTCTGGCTGCTCAAACAACTTACGGTCTTAAATGATGCCAAAGAGTTTTCAAGGTTTCAAGGTAGAGGAAGTTGGTATTCATCACCCGCTGACTCTGAAGAAGAAAATAATGAATCGAGCACTGCTGATAGTTCAGATGAGGCCTTTGATGTTATTCCCAAGTCTTATGCCGATCCTTCAAAATTATTGATATCGGACACCACTGATTTGGTCCATTTAGCTTTTGAGAACAATGGTGGAGATTATGTAAATTTCACTTCAAGAACACCTGATCAATCATTGACTGATAATGTTTCATCACCTCATCTTGCTATGAGTAAGGAATATTCTCCTTGTTCCTCTCCACCATCACCTTCATCAGTTCCCGCTACTCAGCCTCTTCCAACACCAGCACCACCATCTCCTCCATCAAGACCTCTACAGCCAGGTTTAGCCCTTCCCCCTCCTCCTCCCCCACCTCCGCATCCGATAGTTCAGGATGTGAACAATGCTTCTACATTGCCTCCACCTCCTCCTCCCCTTCCCCCTCCTATAGTTTACAATGCTCCTAGTCAGCCTCCACCTCCTCCAGGACCTGTACGAACAAGTTCAGCCCCACCGCCTCCACCACCTCCTCCTCCTCCTCCAGGTCATGTACAGACAGGTTCAGCCCCACCACTTCCTCCTCCACCTCCTCCAGGATCTGTACAAACTGGTTCAGCTCCACCACCTCCACCTTCTCCTCCAGGTCCTGTACGAACAGGTTCAGCCCCACCACCACCTCCACCTCCTCCAGGTCCTGTACGAACAGGTTCTGTCCCGCCACCACCTCCACCTCCTCCAGGTCCTGTACAAACAGGTTCAGCCCCACCACCTCCACCTCCTCCTCCAGGTCCTATACGAACAGGTTCAGCCCCACCACCACCTCCACCTCCTCCAGGTCCTGTACGAACAGGTTCAGCTCCACCACCGCCGCCTCCTCCAGGTCCTGTACGAACAGGTTCAGCTCCACCACCGCCACCACTGGCACCAAAACCTCCAGGTGCTCCTCCTCCTCCACCTGGCCATGGTGCATCACCAATGCCACCTCCACCTCCTGCAGCTAGGGCCCCTGGTGTGGCACCACCACCTGGCAAAGCTTCAACAACAAATCTTGGAAGAGGTCGTGGTTCTGGTGGTACTGCTAATGCTCCTAAGAAAACTTTGCTAAAACCCCTACATTGGGTGAAAGTTGCTCGAGCAGCCAAGGGAAGTCTTTGGGCTGATTCACAGAAACAGGATAGTGGAACAAGGGCCCCTGAGATAGATATATCAGAACTTGAGAGCCTGTTTTCAGCAGCATCTACGTCTGATGGGAGCAGTACTAAAGGTGGAGGCCGGCGTGGTCCTAATATTAACAAACCTGAGAAAGTACAATTGATTGACTTGCGTAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAGATTCCTTTGCCAGATATGCTTAAAGCAGTCCTGGCATTGGATTCTTCAGTTCTGGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCCACAAAGGAAGAGATGGAGATGTTAAAGAATTATTCAGGAAACAAGGAAATGCTTGGAAAGTGTGAACAGTTTTTTATGGAGCTGATGAAGGTTCCACGTGTGGAATCCAAATTAAGGGTTTTTGCCTTTAAAATCACCTTTTCTTCTCAGGTGAACGATTTGAAGTTAAATTTGAACACAATCAACAATGCAGCCAGAGAGGTGAAAGAATCTGGAAAATTGCGTCAAATAATGCAGACTATTCTTACACTGGGCAATGCCTTGAATCAAGGAACAGCACGGGGATCAGCTGTTGGATTCAAATTGGATAGCCTTCTTAAATTATCTGATACCCGTGCAAGAAATAACAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTCGCTGAGAAAATGCCAGAATTGCTAGATTTTGATAAGGATCTAGTCCATTTGGAAGCAGCTTCTAAGATTCAACTAAAAGCATTGGCTGAAGAAATGCAAGCTGTGAGTAAAGGTTTAGAGAAAGTTGAGCAAGAACTCGCTGCTTCTGAAAATGATGGTGCTATATCTACAGGATTTCGTAAGGTGTTAAAGAATTTTCTTGATATTGCTGAAGCTGATGTGAGGTCCCTTATATCATTGTATTCTGATGTGGGAAGAGGTGCAGACTCTTTGTCCCAGTACTTTGGAGAGGATCCAGCTAGATGCCCTTTTGAACAAGTGACACAAATCCTTGTTGTCTTTGTCAAGATGTTCAACAAGTCAAGGGAGGAGAATGAAAGGCAGGCAGATGCTGAAAAAAAGAAATTAGAGAAAGAAGCCTTGAAGGAAAGGACAGCAAATAACTCGCATTCCAAAAAAGATGGCGTTCGATAG 3549 0.4894 MSPLSRFFYKRPPDGLLEFADRVYVFDSCFSTEALPDGMYSLYLRQILADLHDDFPESSFVALNFRDGDHRSSFSRVLCDLDVTVVDYPKQYEGCPLLPLSLVHHFLRLCDSCLADPAALIIFHCERGGWPLLAFLLAAFLVFRKVQSGERRILEMVHKEAPKGLLQLLSALNPLPSQLRYVQYVARRNIGAEWPPPERALSLDCVILRGVPGFDGGNGCRPLFRIFGRNLLSKGGLSTHMIYNMHKKKKSLRHYRQADCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNAENLDILWDSKERYPKGFRTEVLFGEVESISPPRAPTSILDGEVKGGLPIEAFSRVQELFSGVEWVESGDAAAVWLLKQLTVLNDAKEFSRFQGRGSWYSSPADSEEENNESSTADSSDEAFDVIPKSYADPSKLLISDTTDLVHLAFENNGGDYVNFTSRTPDQSLTDNVSSPHLAMSKEYSPCSSPPSPSSVPATQPLPTPAPPSPPSRPLQPGLALPPPPPPPPHPIVQDVNNASTLPPPPPPLPPPIVYNAPSQPPPPPGPVRTSSAPPPPPPPPPPPGHVQTGSAPPLPPPPPPGSVQTGSAPPPPPSPPGPVRTGSAPPPPPPPPGPVRTGSVPPPPPPPPGPVQTGSAPPPPPPPPGPIRTGSAPPPPPPPPGPVRTGSAPPPPPPPGPVRTGSAPPPPPLAPKPPGAPPPPPGHGASPMPPPPPAARAPGVAPPPGKASTTNLGRGRGSGGTANAPKKTLLKPLHWVKVARAAKGSLWADSQKQDSGTRAPEIDISELESLFSAASTSDGSSTKGGGRRGPNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMLKAVLALDSSVLDIDQVENLIKFCPTKEEMEMLKNYSGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSSQVNDLKLNLNTINNAAREVKESGKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELAASENDGAISTGFRKVLKNFLDIAEADVRSLISLYSDVGRGADSLSQYFGEDPARCPFEQVTQILVVFVKMFNKSREENERQADAEKKKLEKEALKERTANNSHSKKDGVR 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01544 1182 PRINTS Proline rich extensin signature 518 534 - -
Pumo8g01544 1182 PRINTS Proline rich extensin signature 494 515 - -
Pumo8g01544 1182 PRINTS Proline rich extensin signature 543 560 - -
Pumo8g01544 1182 PRINTS Proline rich extensin signature 566 591 - -
Pumo8g01544 1182 PANTHER FORMIN-J 1 1177 - -
Pumo8g01544 1182 MobiDBLite consensus disorder prediction 821 844 - -
Pumo8g01544 1182 Coils Coil 1050 1077 - -
Pumo8g01544 1182 Gene3D Protein tyrosine phosphatase superfamily 15 189 IPR029021 -
Pumo8g01544 1182 Coils Coil 948 968 - -
Pumo8g01544 1182 SMART it6_source 525 1182 IPR015425 -
Pumo8g01544 1182 Pfam C2 domain of PTEN tumour-suppressor protein 197 335 IPR014020 -
Pumo8g01544 1182 MobiDBLite consensus disorder prediction 548 749 - -
Pumo8g01544 1182 Gene3D - 195 340 - -
Pumo8g01544 1182 Coils Coil 1144 1167 - -
Pumo8g01544 1182 MobiDBLite consensus disorder prediction 407 430 - -
Pumo8g01544 1182 MobiDBLite consensus disorder prediction 498 541 - -
Pumo8g01544 1182 SUPERFAMILY Formin homology 2 domain (FH2 domain) 782 1163 - -
Pumo8g01544 1182 MobiDBLite consensus disorder prediction 821 836 - -
Pumo8g01544 1182 Pfam Formin Homology 2 Domain 773 1144 IPR015425 -
Pumo8g01544 1182 MobiDBLite consensus disorder prediction 487 777 - -
Pumo8g01544 1182 Gene3D Formin, FH2 domain 770 1155 IPR042201 -
Pumo8g01544 1182 ProSiteProfiles C2 tensin-type domain profile. 198 337 IPR014020 -
Pumo8g01544 1182 ProSiteProfiles Formin homology-2 (FH2) domain profile. 769 1169 IPR015425 -
Pumo8g01544 1182 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 198 337 IPR035892 -
Pumo8g01544 1182 SMART PTEN_C2_2 196 336 IPR014020 -
Pumo8g01544 1182 MobiDBLite consensus disorder prediction 1146 1182 - -
Pumo8g01544 1182 FunFam Formin-like protein 769 1155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01544 Pumo-Chr8 50231694 50269254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01544 1 1169 FH2 protein (formin) Gene Family AT2G25050 46.192 0.0 944
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01544 - - gmx:100781274 967.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01544 8 50231694 50269254 Pumo8g01544 8 50231694 50269254 ECH