Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01520 ATGAACCTGGCCACCGGGCAAGTTACGCCACCAGCTTATAATCCAGTAAATAACAACAACGCTAATACCAATAGAGGTTTTGATTTTGGGATGCCAGCAAATCAAGTGGGTCAACAGTATGGAAGCCAATATAACAATTTTGCTTCAGCAGGTGCTCACACGTCATGCACCAACTGTGGAGGCTCTGGTCATAGCTCTCTACTTTGCCCAAATATTAGAAATCTGCCTTTGGGATCAGGTGGTGGTGCTTCTGCTGAATGCTTTAAATGCCGTCAACCCGGTCACTGGACGAGAGACTGTCCTGGTTTCAGTGCAGCACCTTCATCATATGGGATTGCTCAAAATCAACAATTTGGAGGATATTGA 366 0.4536 MNLATGQVTPPAYNPVNNNNANTNRGFDFGMPANQVGQQYGSQYNNFASAGAHTSCTNCGGSGHSSLLCPNIRNLPLGSGGGASAECFKCRQPGHWTRDCPGFSAAPSSYGIAQNQQFGGY 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01520 121 MobiDBLite consensus disorder prediction 1 23 - -
Pumo8g01520 121 ProSiteProfiles Zinc finger CCHC-type profile. 87 101 IPR001878 GO:0003676|GO:0008270
Pumo8g01520 121 SMART c2hcfinal6 86 102 IPR001878 GO:0003676|GO:0008270
Pumo8g01520 121 SMART c2hcfinal6 55 71 IPR001878 GO:0003676|GO:0008270
Pumo8g01520 121 Gene3D - 48 114 - -
Pumo8g01520 121 SUPERFAMILY Retrovirus zinc finger-like domains 44 102 IPR036875 GO:0003676|GO:0008270
Pumo8g01520 121 Pfam Zinc knuckle 87 101 IPR001878 GO:0003676|GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01520 19 78 Core DNA Replication Machinery Family AT5G45400 43.548 9.52e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01520 K07466 - gmx:100778597 144.05