Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01514 ATGTTTACATGCATAGCGTGTACGAAGCAAGCGGCGGAGGAGAAGGAAGAAGAAGAGGGTGAGAGTGGCACGCCGAGTACAAAAGAAGCCGTCAAAAGCCTGAGTGCGCAGTTAAAGGATATGGCACTGAAGTTTTCTGGTGCCTACAAGCAGTGCAAACCTTGCACAGGGTCCAGTACCTTCAAGAAAGGACAGAAGCCATATCCTGACTTTGACACCATTTCAGAAGGGGTTCCATACCCTTATATTGGAGGTGCAAGCTCAACTTCAACCCCTGCTTGGGACTTCACAAGCTCCAATTTCCCTGGTGGTAGATCAGACCAAAGATTCATGGGGGGATTCAGTGGTGATAGGACCCCTAGAGGGCCTCAATCAGCATCAGCCTGTGATGTAGTTGTTGAGGATCAGGATGAAACCAAGGAGTGGATGGCACAGGTGGAACCAGGGGTTCACATTACCTTTGTGTCTCTTCCTAATGGGGGAAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATTTTCGACAAGTGGCAAGCTCAAAAATGGTGGGGTGAGAATTATGACAGAATCATGGAACTTTACAACGTGCAGAGATTCAATCGACAAGCTCTCAACACTCCTTCAAGATCTGAGGATGAGCAAAGAGATTCTTCTTACTCAAGAATGACATCTGGACAAGATAGCCCCATGCATTCCATGTCCTTAAAGGATTGGACACCAAGGAATCACTATAAACCCTCAGGGAATAATCCCTCTGAAGCAATGGATCAAGGTGGTGGCCAAAACTTCCATGCAGCTTCATCTGTGGAAGCATCAAGGACAACCACCTCTTCGAGAGACGAGCGTTCAATGAGCAATGCCAGTGACTTGGAGACAGAATGGATAGAGCAAGATGAACCTGGAGTGTACATTACAATCAGGCAATTAGCTGATGGAACTAAGGAGCTTCGCCGTGTCAGATTCAGCCGGGAGAGATTTGGGGAGGGACATGCAAAGAAATGGTGGGAAGACAACAGAGAAAGAATACAAGCTCAATATCTTTGA 1044 0.4693 MFTCIACTKQAAEEKEEEEGESGTPSTKEAVKSLSAQLKDMALKFSGAYKQCKPCTGSSTFKKGQKPYPDFDTISEGVPYPYIGGASSTSTPAWDFTSSNFPGGRSDQRFMGGFSGDRTPRGPQSASACDVVVEDQDETKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREIFDKWQAQKWWGENYDRIMELYNVQRFNRQALNTPSRSEDEQRDSSYSRMTSGQDSPMHSMSLKDWTPRNHYKPSGNNPSEAMDQGGGQNFHAASSVEASRTTTSSRDERSMSNASDLETEWIEQDEPGVYITIRQLADGTKELRRVRFSRERFGEGHAKKWWEDNRERIQAQYL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01514 347 Pfam Transcription factor BRX N-terminal domain 22 55 IPR027988 -
Pumo8g01514 347 Pfam Transcription factor regulating root and shoot growth via Pin3 140 194 IPR013591 -
Pumo8g01514 347 Pfam Transcription factor regulating root and shoot growth via Pin3 291 346 IPR013591 -
Pumo8g01514 347 MobiDBLite consensus disorder prediction 204 293 - -
Pumo8g01514 347 ProSiteProfiles BRX domain profile. 140 195 IPR013591 -
Pumo8g01514 347 MobiDBLite consensus disorder prediction 243 291 - -
Pumo8g01514 347 MobiDBLite consensus disorder prediction 219 235 - -
Pumo8g01514 347 ProSiteProfiles BRX domain profile. 292 347 IPR013591 -
Pumo8g01514 347 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 347 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01514 Pumo-Chr8 49744107 49750998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01514 1 347 Major Intrinsic Protein MIP AT1G31880 64.804 4.95e-160 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01514 - - gmx:100809614 671.003