Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01512 ATGGCTGCTTCAAGCTCTCTCTTGAGGATGGAACACATACCTGGCAAAGGAAGAGGTCTTGTTGCAGCAAAGCCCCTTAAAGCAGGCCAAATAGTCCTCACTGAATCCCCTCTCATTCTCTACTCAGCTTCTCCTCTCTTTGCACCCTCTTCTTCACCCTTCACTTACTGTGACCATTGTTTCAGAATCATACCCTCTCACACTCCGAATAGTGTTCCATGCCCCTCTTGCTCCAACCACTTTTTCTGCTCCCAAAAGTGCCTCTCCCTTGCACTCAACTCCTCACACTCCACTTGGGTATGCAAAGCACTCACATCTCTTCAAAAACACCCCAATTCAACACTTCTTCAACAACACCCCCCAGAACGCCAAGTCCAAGCTCGTCTCATTGTTGCTTCTCACAACCTCTTCCTTCACTCCCCTTCTGATCTTCACACTTTGCTTTCTCTTCATGGCACCCCAGATAATGATGCTATTCTTGCTGCTGCTACCTTTCTTCACTCTCTAATCTCACCTCTTTTCCCACCCCAGGGTCAACTTTCTGTGGATCTCACTGCACAAATTCTTGCAAAGGACAGACTCAACTCCTTTTGCTTAATGGACCCCTATTCCCCTGATGGGCCTCAGAGATCCATTAAGGCCTATGCCATTTACCCCAAAGCCACGTTCTTCAACCATGACTGTGTTCCCAATGCATGCAGGTTTGATTATGTGGACACTAGTGATGAACACAACACTGACATTGTTGTTAGGTTGATTGAGGATGTTGCTGAGGGGAAAGAGGTTTGCATCAGCTATTTCAGGATTGGTAGGGACTATTGTACCAGGAAAAGGATCTTGATGGAGGATTATGGATTCACTTGTGGCTGTGATAGGTGCAAGATTGAAGCCAATTGGGATGGTGGAGAGAAGAACAGTGACCTGCCACACGTGCGGTTCCTTTGCAAGTATGTATGTGAGAGGAAGAATTGTGCGGGCACTATGGCTCCTCTGCCTCCAAAAGATGATGTGTCATCTAATGTTCTGGAATGTAACTTCTGTGGTAATTTGAAAATTGATTCTGATACTGCTTAG 1074 0.4628 MAASSSLLRMEHIPGKGRGLVAAKPLKAGQIVLTESPLILYSASPLFAPSSSPFTYCDHCFRIIPSHTPNSVPCPSCSNHFFCSQKCLSLALNSSHSTWVCKALTSLQKHPNSTLLQQHPPERQVQARLIVASHNLFLHSPSDLHTLLSLHGTPDNDAILAAATFLHSLISPLFPPQGQLSVDLTAQILAKDRLNSFCLMDPYSPDGPQRSIKAYAIYPKATFFNHDCVPNACRFDYVDTSDEHNTDIVVRLIEDVAEGKEVCISYFRIGRDYCTRKRILMEDYGFTCGCDRCKIEANWDGGEKNSDLPHVRFLCKYVCERKNCAGTMAPLPPKDDVSSNVLECNFCGNLKIDSDTA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01512 357 Gene3D - 56 117 - -
Pumo8g01512 357 SMART set_7 6 273 IPR001214 GO:0005515
Pumo8g01512 357 ProSiteProfiles SET domain profile. 5 267 IPR001214 GO:0005515
Pumo8g01512 357 Gene3D - 118 196 - -
Pumo8g01512 357 Gene3D SET domain 19 294 IPR046341 -
Pumo8g01512 357 Pfam SET domain 17 266 IPR001214 GO:0005515
Pumo8g01512 357 SUPERFAMILY SET domain 8 294 IPR046341 -
Pumo8g01512 357 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 303 355 IPR044238 -
Pumo8g01512 357 CDD SET_SMYD 194 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01512 Pumo-Chr8 49714633 49715765 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pumo8g01512 SET 1.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01512 - - gmx:100808530 626.706