Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01511 ATGAGCGTTCCTCCGCCGTCTGCAGCGGCGATGTGGACGCCGTTCACGGCGGCGCAGTGGCACGAGCTGGAGCACCAGGCCCTCATCTTCAAGTACCTCAAGGCGGGTCTCTCGGTTCCCCCTGACCTGCTTCTCCCCATTCGCAAGAGCCTCCAATTGATGTCTCACCCATCTCTTGGGTATTATGGGAAGAAGATAGACCCTGAACCGGGTCGGTGCAGGAGAACCGATGGGAAGAAGTGGAGGTGTTCGAGGGATGCGCACCCTGACTCCAAGTACTGCGACCGCCATATGATACGACGTCGTTACCGTTCAAGAAAGCCTGTGGAATCATCTCAAACTCACTCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTGCTTCTTCAAATTCAAAACCTGTTGCTGCTGCTTCTACTGGTTCTGCTGCTACTGCTTCTGCAACTGCAACAACCCTTCACACCCTTCCCTTGCACACCAATGGTGCTAGGGAAGGCTTCACTTTCACCCTTGGGAACAACACCAACACCACCCTCCCCCGCCTTCACATGAACCCCCTCACTCTTTCAGGTGACAATACCAGGAAAACTTACAGGTTTGGACTGAACTCAGAAGCAGATGAGCACAACGTCTTACAGAAAGATCTGGGAAGTGTGAGGTATCAAGGTTATGACTTCACCTCAGATGCAATGTGGTCTCAAATGTCTCAAATTCCATCAAATACTGTTTCGGAATCGAGAAGTGGTTCTACTATGCTGGGCAACTGCTTCCAACAGCAAACAATGCGAGACGCTGAGCTTCTGAACCTGGAAACTGCAAGGACCAAAGACCTTGTTTTTAGTGGCCAGTTAGGTTCAGCAGGAGGGGATTTGAAACAGGAATATCAGTCTCCCCAGTCTCTCTTCAGTGACTGGGACTGGAAGAAGGATTTAAGTTCCTCTGCCATTGAGTATAGGCCCAACAAGGATTTTAACTGCAACCCAGATGTCAATGTTGATTAA 999 0.5045 MSVPPPSAAAMWTPFTAAQWHELEHQALIFKYLKAGLSVPPDLLLPIRKSLQLMSHPSLGYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCDRHMIRRRYRSRKPVESSQTHSSASASASASAASSNSKPVAAASTGSAATASATATTLHTLPLHTNGAREGFTFTLGNNTNTTLPRLHMNPLTLSGDNTRKTYRFGLNSEADEHNVLQKDLGSVRYQGYDFTSDAMWSQMSQIPSNTVSESRSGSTMLGNCFQQQTMRDAELLNLETARTKDLVFSGQLGSAGGDLKQEYQSPQSLFSDWDWKKDLSSSAIEYRPNKDFNCNPDVNVD 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01511 332 MobiDBLite consensus disorder prediction 104 128 - -
Pumo8g01511 332 ProSiteProfiles WRC domain profile. 67 111 IPR014977 -
Pumo8g01511 332 SMART QLQ_2 13 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pumo8g01511 332 MobiDBLite consensus disorder prediction 110 128 - -
Pumo8g01511 332 ProSiteProfiles QLQ domain profile. 14 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pumo8g01511 332 Pfam QLQ 14 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pumo8g01511 332 Pfam WRC 68 110 IPR014977 -
Pumo8g01511 332 PANTHER GROWTH-REGULATING FACTOR 5 13 304 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01511 Pumo-Chr8 49706948 49710819 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01511 14 113 GRF Transcription Factor Family AT3G13960 58.036 8.31e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pumo8g01511 WRC 2.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01511 - - gmx:100809947 575.474