Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01491 ATGGCAGATAGTTCAGTATCGTTTTTACTGGACAAGCTGACTTTGTTACTTCAAGCAGAAGTGAATCTGCAGAGAGGGGTCCGTGAAGATGTTCAGCACATCAAATATGAACTGGAACGCCACAGGGGCATCTTGAGGATGGCTGATGCTCTGGAAGACAAAGACCCTGAACTCAAAGCATGGGTTAAACGAGTAAGAGATGTTGCTCATGACATGGAAGATGCTATAGATGAATTCAACCTTCGCCTTGTTGAACAACATGGACAAGGCAACAATTATCCTTTTCATAAGTATTTTTCCAGGCATAAGATTGCTTCAAATATACAAGGTATCAAATCCAGAGTGGACATTATATCCCAGGGACGTCCAAACATACCTGGGATGGGCTCAGGCTCAAGTCAACGGTTGTCATCAAGGCTTGATAGCCAAGGTGATGCACTTCTGCTAGAAGAAGCTGATCTAGTGGGTATCGACCAACCCAAAAAGCAGCTCAGTGACTTGCTTTTCAAAGAAGAAGCAGGTAGGGCTGTGATTCCCATTTATGGGATGGGAGGGTTGGGGAAAACCACCTTGGCAAAACAAGTCTATGAAGATCCAAAAGTGAAGAAGCGTTTCAGGATTCATGCTTGGATTAATGTTTCTCAGTCTTTTAAACTAGAAGAGCTCCTGAAAGACCTGGTTCAACAGCTGCATAATGTCATTGGCAAACCAGCTCCGGAGGCAGTTGGACAAATGAAAAGTGACAAGCTCAAAGAGGTGATCAAGAACTTGCTTCAGCAAAGCAGGTACCTCATTGTGCTGGATGATGTGTGGCACGTAAAGGTATGGGATTCTGTCAAACTTGCTTTGCCTAATAACAACCGTGGCAGTAGAGTGATGCTTACCACACGCAAGAAAGATATAGCTTTGCATTCCTGTGCCGAATTGGGTAAGGATTTTAACCTTGAATTCTTACCTGAGGAAGAAGCTTGGCATCTTTTCTGCATGAAAACATTTCAGGGTAACTCATGCCCTCCTCATCTGGAGGAAGTTTGCAGGAATATCTTAAAAATGTGTGGGGGGTTGCCACTAGCAATTGTGGCAATTGGTGGAGCTTTGGCTACAAGAGGGAGGGCAAACATAGAAGAGTGGCAGATGGTTTGCAGAAGTTTTGGGTCTGAAATTGAAGGCAATGACAAACTGGAGGATATGAAGAAAGTGCTTTCCCTCAGTTTCAATGAGTTACCTTACTATCTCAAGTCCTGTTTGTTGTACCTAAGCATCTTTCCTGAGTTTCATGCCATTGAGCACATGCGATTGATTCGCTTGTGGATAGCTGAAGGGTTTGTGAATGGAGAAGATGGAAAGACGTTGGAGGAAGTTGCAGACAGTTACCTCAAGGAGCTCTTGGACAGAAGTCTGCTGCAAGTGGTATCAAAAACCAGTGATGGCAGGATGAAGACTTGTCGCATGCATGATCTTCTAAGGGAGATTGTCAATTTGAAGTCAAAGGATCAGAACTTTGCAACAATAGCCAAAGACCAAGACATAATCTGGCCAGACAAAGTTCGACGCCTATCAATCATAAACACATTGCATAATGTGCAACAAAATAGGACAACGTTCCAACTTCGGTCTCTGCTAATGTTTGCCTTATCAGATTCACTCGAGCATTTTTCTATACGTGCATTATGTTCCACTGGTTATAAGTTACTCAGGGTGTTAGATTTGCAGGATGCACCTTTGGAGGTTTTTCCTGCTGAAATTGTCAGCCTTTACCTTCTCAAGTATCTGAGTTTGAAGAATACAAAGGTGAAAAGCATTCCAGGTTCCATTAAGAAGCTGCAGCAGTTGGAGACATTAGATCTTAAACACACTTATGTCACTGTATTGCCAGTTGAAATTGTGGAGCTACAACGATTACGCCATCTCTTGGTGTATCGTTATGAGATTGAATCCTATGCTTATTTACATTCAAGGCATGGCTTCAAGGTGGCTGCCCCTATAGGACTTATGCAATCTTTGCAAAAGCTATGTTTTATAGAGGCAGATCAGGCTTTGATGATTGAGCTAGGAAAACTCACTCAACTCAGGAGGCTTGGCATTAGAAAGATGAGGCAACAAGATGGTGCTGCTCTGTGTTCATCCATTGAGAAGATGATCAATCTCCGCTCATTGTCCATAACTGCAATTGAAGAAGATGAGATAATTGATATTCACAACATTTTCAGGCCTCCTCAGTATCTCCAGCAGTTATACTTGGGTGGACGTCTAGACAATTTTCCCCACTGGATAAGTTCTCTCAAGAATTTGGTCCGGGTGTTTCTAAAATGGAGCCAGTTAAAGGAGGATCCTCTGGTACATCTTCAAGATTTGCCAAATCTAAGACATCTTGAGTTTCTTAAAGTTTATGTTGGTGAGACATTGTGTTTCAAGGCTAATGGGTTTCCTAGTCTGAAGGTGTTAGGCCTTGATTATTTAGATGGACTGAAATCTATGACTGTGGAGGAGGGAGCAATGCCTGGTCTTAAAAAGCTCATCATCCAGCGCTGTAATTCATTCAAGCAGGTACCGAGAGGCATTGAACACCTAATCAAACTTAAATCAATAGAGTTTTTTGATATGCCTGAAGAATTGATTACTGCATTGCGTCCAAATGGAGGTGAGGATTATTGGAGAGTACAACATGTCCCAGCAGTTTATTCCTCATATTGGAGGGATGGTGGTTGGGATGTCTACTCATTAGAGACTCTAGGAGACAGAGAGAGTGATTCCAGTCGTGGTACGGCAATGAGAAATCTTGAAATTTGTACGCTCTGGAAGGTTTAA 2808 0.4256 MADSSVSFLLDKLTLLLQAEVNLQRGVREDVQHIKYELERHRGILRMADALEDKDPELKAWVKRVRDVAHDMEDAIDEFNLRLVEQHGQGNNYPFHKYFSRHKIASNIQGIKSRVDIISQGRPNIPGMGSGSSQRLSSRLDSQGDALLLEEADLVGIDQPKKQLSDLLFKEEAGRAVIPIYGMGGLGKTTLAKQVYEDPKVKKRFRIHAWINVSQSFKLEELLKDLVQQLHNVIGKPAPEAVGQMKSDKLKEVIKNLLQQSRYLIVLDDVWHVKVWDSVKLALPNNNRGSRVMLTTRKKDIALHSCAELGKDFNLEFLPEEEAWHLFCMKTFQGNSCPPHLEEVCRNILKMCGGLPLAIVAIGGALATRGRANIEEWQMVCRSFGSEIEGNDKLEDMKKVLSLSFNELPYYLKSCLLYLSIFPEFHAIEHMRLIRLWIAEGFVNGEDGKTLEEVADSYLKELLDRSLLQVVSKTSDGRMKTCRMHDLLREIVNLKSKDQNFATIAKDQDIIWPDKVRRLSIINTLHNVQQNRTTFQLRSLLMFALSDSLEHFSIRALCSTGYKLLRVLDLQDAPLEVFPAEIVSLYLLKYLSLKNTKVKSIPGSIKKLQQLETLDLKHTYVTVLPVEIVELQRLRHLLVYRYEIESYAYLHSRHGFKVAAPIGLMQSLQKLCFIEADQALMIELGKLTQLRRLGIRKMRQQDGAALCSSIEKMINLRSLSITAIEEDEIIDIHNIFRPPQYLQQLYLGGRLDNFPHWISSLKNLVRVFLKWSQLKEDPLVHLQDLPNLRHLEFLKVYVGETLCFKANGFPSLKVLGLDYLDGLKSMTVEEGAMPGLKKLIIQRCNSFKQVPRGIEHLIKLKSIEFFDMPEELITALRPNGGEDYWRVQHVPAVYSSYWRDGGWDVYSLETLGDRESDSSRGTAMRNLEICTLWKV 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01491 935 FunFam Probable disease resistance protein At1g63360 405 493 - -
Pumo8g01491 935 Pfam NB-ARC domain 159 406 IPR002182 GO:0043531
Pumo8g01491 935 Gene3D - 317 404 IPR042197 -
Pumo8g01491 935 Gene3D Ribonuclease Inhibitor 523 878 IPR032675 -
Pumo8g01491 935 FunFam Probable disease resistance protein At1g61300 145 309 - -
Pumo8g01491 935 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 419 IPR027417 -
Pumo8g01491 935 CDD RX-CC_like 2 119 IPR038005 -
Pumo8g01491 935 PRINTS Disease resistance protein signature 257 271 - -
Pumo8g01491 935 PRINTS Disease resistance protein signature 606 622 - -
Pumo8g01491 935 PRINTS Disease resistance protein signature 352 366 - -
Pumo8g01491 935 PRINTS Disease resistance protein signature 177 192 - -
Pumo8g01491 935 Gene3D - 405 495 IPR036388 -
Pumo8g01491 935 Pfam Rx N-terminal domain 6 89 IPR041118 -
Pumo8g01491 935 Gene3D - 5 117 - -
Pumo8g01491 935 Gene3D - 143 308 IPR027417 -
Pumo8g01491 935 SUPERFAMILY L domain-like 483 871 - -
Pumo8g01491 935 PANTHER DISEASE RESISTANCE PROTEIN RP 57 848 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01491 Pumo-Chr8 49501998 49505637 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01491 155 619 WRKY Transcription Factor Family AT5G45050 19.804 9.66e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01491 K13457 - gmx:100305458 1691.78