Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01489 ATGGCAGAGAGTGCAGTGAGTTTTCTTCTAGAAAGGCTTAGACCTGTTTTTGATTTTGAGAATAAGGTGAAATTGTTCACAGGGGTTGAAGCAGAAGTGACACATCTGAAAGGACAGTTGGAGCTGATAAGAGTCTTCTTAAGGGCTGCAGATGCATTTGAAGAGAGTGATGAGGAACTCAAAGTTTGGGTTAAGCAAGTCAGAGATGTTGTTCATGAGGCTGAAGATCTTCTTGATGAATTGGAGCTTGTCCAGGTACATAACCATACAAATATATTCTCTAGCTACAGTATCAGGAATATGAAAGTGCGGTATCGGATTGCGCATGAGTTAAAATGCATCAACTCACGCATGAAAACTATCTCTTCAACTCGCACGAGATTCCTCAGTACACTTGACACTGCTTCAGAGGCTTCAAATTCCAGTTATACAGGTAACACATGGCATGATCAACGAGGAGATGCCCTTCTCCTGGACAACACTGATCTAGTGGGCATAGAGAGGCCAAAAAAGCAGTTGATCGGGTGGTTGATCAACGGTTGTCCAGGGCGAAAAGTGATTTCTGTTACTGGAATGGGAGGGATGGGAAAAACTACTTTGGTGAAGAAAGTATATGATGATCCAGAAGTAAGAAAACACTTCAAAGCCTGTGTTTGGGTTACTGTTTCTCAATCCTGTAAAATAGAGGATCTTCTCAAAGACTTGGCCCAGAAGCTTTTTTCCGAAATAAGGCGACCGATTCCAGAAGGAATGGAAAGCATGTGTAGTGATAAGCTGAAGATGATCATCAAAGACCTGCTTCAGAGGAAGAGGTATCTAGTGGTATTTGATGATGTGTGGCACATGTATGAATGGGAAGCTGTCAAATATGCATTGCCTAACAATAATTGTGGCAGCAGGATCATGATCACCACACGCAGATCTGATTTAGCCTTTACTTCCAGCATAGAATCCAATGGTAAGGTGTATAACTTGCAACCCTTGAAAGAAGATGAGGCTTGGGATCTATTTTGTAGGAACACTTTTCAGGGTCATTCATGCCCCTCACATTTGATTGATATCTGTAAATATATCTTAAGAAAATGTGGGGGTCTTCCCCTTGCAATTGTGGCAATAAGTGGTGTCCTGGCTACAAAAGACAAGTGCAGGATAGATGAATGGGACATGATTTTCCGTACTCTTGGAGCTGAAATTCAAGGCAATGGCAAACTTGATAATTTCAAAACAGTTCTCAACCTCAGTTTCAATGATTTACCTTACCATTTGAAATACTGCTTCTTGTACTTGAGCATCTTTCCTGAGGACTATCTGATTCAGCGCATGAGATTGATTCGCCTATGGATAGCAGAAGGATTCATTGAAGCCAAGGAAGGAAAAACAAAGGAAGATGTTGCAGATGATTACCTCAAGGAGCTCCTGAACAGAAACTTGATACAAGTAGCAGAGACAACATCTGATGGAAGGATCAAAACTTTGCGAATCCATGATCTTCTAAGGGAGATCATCATTTTGAAGTCCAAGGACCAAAACTTTGTATCCATTGTCAAAGAACAAAGCATGGCATGGCCTGAAAAGATTCGGCGCCTTGCGGTGCACGGCGCATTACCATATAATCGGCAGCAACAACATAGGTCAGGCTCTCAACTCCGTTCTCTCTTGATGTTTGGGGTTGGAGAAAATTTATCTCTTGGCAAACTGTTTCCAGGAGGTTCCAAACTGCTTAGTGTTTTAGATTATCAAGATGCACCTTTGAAGAACTTTCCAGTAGCAGTTGATGATCTATATCATTTAAGATATCTAAGCTTAAGGAACACAAAGGTGAAAATGGTTCCAGGCCACATAATAGGGAAGTTGCACAATCTAGAAACACTGGATCTTAAGATGACTTGTGTCAGAGAATTGCCTGTAGATATACTAAAGCTTCAAAAGCTTCGCCATCTCCTTGTGTATCAGTTTAAAGTCAAAGGCTATGCACAGTTCTACTCCAAACATGGTTTTAAGGCCCCCACTGAAATAGGAAATTTGAAGTCACTACAAAAGCTTTGTTTTGTGGAGGCAAACCAAGACTGTGGAATGATGATAAGGCAGTTAGGGGAGCTAAGCCAACTAAGAAGGTTAGGCATCTTGAAACTTAGAGAGGAAGATGGGAAGGCTTTCTGTTTGTCCATCGAGAGATTAACCAATCTCCATGCCCTTTCTGTTACTTCTGAGGGTGAGAATAAAGTCATTGATCTAGCATTCCTTTGTTCACCCCCTCCATTTCTTCAACGCTTGTATTTGTCAGGGCGTCTACAAGAGTTACCAAGTTGGATACAGTCTCTTCATAGCCTGGCCAGGCTATTTCTCAAATGGAGCTGTTTAAAACATGATCCACTAGTATACCTGCAGGATCTTCCAAGCCTTGCACATCTTGAACTGCTTCAAGTTTATGATGGTGACACATTGCATTTCATGTGTGGAAAGTTCAAGAAGCTCAAGGTTTTAGGCCTTGACAAGTTTGATGGACTCAAACAGGTGACAGTGGGGGAGGATGCAATGCCTTGCCTAGAAAGGATGAGCATTGGACGTTGTGAGTTGTTGAAGATGGTTCCATCAGGCATTGAGCACTTGACTAAGCTGAAAGTCCTTGAGTTTTTTGATATGCCAGATGAACTGATGAAGACAATATGTCCACATGGTCCAGGAAAAGATTACTGTAAAGTTTCACATATACCAGATGTTTATTCTACCTACTGGAGAGATGATGGTTGGGATGTTTATCCTCTAGACAGTTTCAGCAGAGATTGTTCTCCCAGGTCTGGCACAGTCATGAGAAGTCATGAACCTCGCACTCAGTGGAAGGTGTAG 2847 0.4183 MAESAVSFLLERLRPVFDFENKVKLFTGVEAEVTHLKGQLELIRVFLRAADAFEESDEELKVWVKQVRDVVHEAEDLLDELELVQVHNHTNIFSSYSIRNMKVRYRIAHELKCINSRMKTISSTRTRFLSTLDTASEASNSSYTGNTWHDQRGDALLLDNTDLVGIERPKKQLIGWLINGCPGRKVISVTGMGGMGKTTLVKKVYDDPEVRKHFKACVWVTVSQSCKIEDLLKDLAQKLFSEIRRPIPEGMESMCSDKLKMIIKDLLQRKRYLVVFDDVWHMYEWEAVKYALPNNNCGSRIMITTRRSDLAFTSSIESNGKVYNLQPLKEDEAWDLFCRNTFQGHSCPSHLIDICKYILRKCGGLPLAIVAISGVLATKDKCRIDEWDMIFRTLGAEIQGNGKLDNFKTVLNLSFNDLPYHLKYCFLYLSIFPEDYLIQRMRLIRLWIAEGFIEAKEGKTKEDVADDYLKELLNRNLIQVAETTSDGRIKTLRIHDLLREIIILKSKDQNFVSIVKEQSMAWPEKIRRLAVHGALPYNRQQQHRSGSQLRSLLMFGVGENLSLGKLFPGGSKLLSVLDYQDAPLKNFPVAVDDLYHLRYLSLRNTKVKMVPGHIIGKLHNLETLDLKMTCVRELPVDILKLQKLRHLLVYQFKVKGYAQFYSKHGFKAPTEIGNLKSLQKLCFVEANQDCGMMIRQLGELSQLRRLGILKLREEDGKAFCLSIERLTNLHALSVTSEGENKVIDLAFLCSPPPFLQRLYLSGRLQELPSWIQSLHSLARLFLKWSCLKHDPLVYLQDLPSLAHLELLQVYDGDTLHFMCGKFKKLKVLGLDKFDGLKQVTVGEDAMPCLERMSIGRCELLKMVPSGIEHLTKLKVLEFFDMPDELMKTICPHGPGKDYCKVSHIPDVYSTYWRDDGWDVYPLDSFSRDCSPRSGTVMRSHEPRTQWKV 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01489 948 Gene3D - 4 120 - -
Pumo8g01489 948 Gene3D - 415 505 IPR036388 -
Pumo8g01489 948 Pfam Rx N-terminal domain 5 89 IPR041118 -
Pumo8g01489 948 CDD RX-CC_like 2 123 IPR038005 -
Pumo8g01489 948 PRINTS Disease resistance protein signature 266 280 - -
Pumo8g01489 948 PRINTS Disease resistance protein signature 186 201 - -
Pumo8g01489 948 PRINTS Disease resistance protein signature 616 632 - -
Pumo8g01489 948 PRINTS Disease resistance protein signature 362 376 - -
Pumo8g01489 948 FunFam Probable disease resistance protein At1g61300 154 319 - -
Pumo8g01489 948 Pfam NB-ARC domain 167 416 IPR002182 GO:0043531
Pumo8g01489 948 Gene3D - 157 317 IPR027417 -
Pumo8g01489 948 Coils Coil 64 84 - -
Pumo8g01489 948 FunFam Probable disease resistance protein At1g63360 415 504 - -
Pumo8g01489 948 SUPERFAMILY L domain-like 494 883 - -
Pumo8g01489 948 PANTHER DISEASE RESISTANCE PROTEIN RP 47 857 IPR044974 GO:0006952
Pumo8g01489 948 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 429 IPR027417 -
Pumo8g01489 948 Gene3D - 327 414 IPR042197 -
Pumo8g01489 948 Gene3D Ribonuclease Inhibitor 541 907 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01489 Pumo-Chr8 49489994 49493973 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01489 185 811 WRKY Transcription Factor Family AT5G45050 22.388 1.74e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01489 K13457 - gmx:100805346 1756.5